SMTL ID : 6wid.1

Nucleotide incorporation intermediate into quaternary complex of human Polymerase Mu on a complementary DNA double-strand break substrate

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.50 Å
Oligo State
monomer
Ligands
1 x DC- DG- DG- DC- DA- DT: DNA (5'-D(*CP*GP*GP*CP*AP*T)-3')(Non-covalent)
1 x DA- DC- DG: DNA (5'-D(*AP*CP*G)-3')(Non-covalent)
1 x DC- DG- DT- DA- DT: DNA (5'-D(*CP*GP*TP*AP*T)-3')(Non-covalent)
1 x DG- DC- DC- DG: DNA (5'-D(P*GP*CP*CP*G)-3')(Non-covalent)
1 x DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE(Non-covalent)
1 x PPV: PYROPHOSPHATE(Non-covalent)
2 x MG: MAGNESIUM ION(Non-covalent)
1 x NA: SODIUM ION(Non-functional Binders)
1 x CL: CHLORIDE ION(Non-functional Binders)
1 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
2 x GOL: GLYCEROL(Non-functional Binders)
1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Kaminski, A.M. et al., Structural snapshots of human DNA polymerase mu engaged on a DNA double-strand break. Nat Commun (2020)
Release Date
2020-10-07
Peptides
DNA-directed DNA/RNA polymerase mu: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A