SMTL ID : 6wk8.1

Crystal structure of Gdx-Clo from Small Multidrug Resistance family of transporters in complex with phenylguanidinium

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

hetero-2-2-mer

Ligands

1 x PL0: 1-phenylguanidine(Non-covalent)

PL0.1: 9 residues within 4Å: Chain A: E.13, W.16, M.39, S.42, W.62 Chain B: E.13, W.16, M.39, W.62 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:W.16, A:M.39, A:W.62 Salt bridges: A:E.13, B:E.13

1 x 9PD: Dodecyldimethylphosphine oxide(Non-covalent)

9PD.2: 6 residues within 4Å: Chain A: F.43, Y.44, Q.48 Chain B: G.25, F.26 Chain D: Y.33 5 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D, 2 interactions with chain A Hydrophobic interactions: B:F.26, B:F.26, D:Y.33, A:F.43, A:Y.44

1 x DMU: DECYL-BETA-D-MALTOPYRANOSIDE(Non-covalent)

DMU.3: 2 residues within 4Å: Chain B: T.95, I.98 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:T.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kermani, A.A. et al., The structural basis of promiscuity in small multidrug resistance transporters. Nat Commun (2020)

Release Date

2020-10-28

Peptides

Multidrug resistance protein, SMR family: AB
L10 monobody: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Multidrug resistance protein, SMR family

L10 monobody

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