SMTL ID : 6wlf.1 (1 other biounit)

Phosphoethanolamine Methyltransferase from the Pine Wilt Nematode Bursaphelenchus xylophilus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x OPE: PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER(Non-covalent)

OPE.1: 12 residues within 4Å: Chain A: M.18, M.19, L.20, W.115, M.118, Y.119, S.147, P.151, S.152, H.162, Y.172 Ligands: SAH.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.119, A:Y.119, A:S.147, A:S.152, A:Y.172, A:Y.172 Water bridges: A:T.170 Salt bridges: A:H.162

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.2: 20 residues within 4Å: Chain A: W.6, M.18, G.51, A.52, G.53, R.56, F.57, D.72, F.73, I.74, F.77, S.96, D.97, A.98, N.114, W.115, L.116, Y.119, L.120 Ligands: OPE.1 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.51, A:F.73, A:D.97, A:A.98, A:N.114 Water bridges: A:A.52, A:N.114 Salt bridges: A:R.56 pi-Stacking: A:F.73, A:F.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S.G. et al., Structural and biochemical analysis of phosphoethanolamine methyltransferase from the pine wilt nematode Bursaphelenchus xylophilus. Mol.Biochem.Parasitol. (2020)

Release Date

2020-06-17

Peptides

Phosphoethanolamine N-methyltransferase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoethanolamine N-methyltransferase 1

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