SMTL ID : 6wp0.1 (3 other biounits)

The Crystal Structure of Domain-Swapped Trimer Q108K:T51D variant of HCRBPII

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.78 Å

Oligo State

homo-trimer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: T.1 Chain C: G.112 No protein-ligand interaction detected (PLIP) GOL.2: 5 residues within 4Å: Chain A: K.40, D.51 Chain C: V.62, W.106, K.108 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:K.108, C:K.108, A:K.40 GOL.3: 5 residues within 4Å: Chain A: Y.60, E.72, Q.97, W.106, L.119 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.60, A:Q.97, A:Q.97 GOL.4: 1 residues within 4Å: Chain A: D.24 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.24 GOL.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) GOL.6: 2 residues within 4Å: Chain C: D.123, V.125 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghanbarpour, A. et al., Human Cellular Retinol Binding Protein II Forms a Domain-Swapped Trimer Representing a Novel Fold and a New Template for Protein Engineering. Chembiochem (2020)

Release Date

2020-08-19

Peptides

Retinol-binding protein 2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
I

C
K

Retinol-binding protein 2

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