SMTL ID : 6wpi.1

Crystal structure of Nop9 in complex with ITS1 RNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.02 Å

Oligo State

monomer

Ligands

1 x TCE: 3,3',3''-phosphanetriyltripropanoic acid(Non-covalent)

TCE.1: 5 residues within 4Å: Chain A: Q.255, G.258, I.259, R.262, R.306 4 PLIP interactions: 4 interactions with chain A Salt bridges: A:K.162, A:R.262, A:R.264, A:R.306

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: V.485, I.487, R.490, F.579 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.490, A:R.490, A:K.523, A:K.523

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, J. et al., Nop9 recognizes structured and single-stranded RNA elements of preribosomal RNA. Rna (2020)

Release Date

2020-05-20

Peptides

Nucleolar protein 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleolar protein 9