SMTL ID : 6wqp.1 (1 other biounit)

GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 9 residues within 4Å: Chain A: T.24, I.25, G.26, L.308, A.311, K.312, I.316, R.317, C.318 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.317, A:R.317, A:C.318, A:C.318 EDO.2: 7 residues within 4Å: Chain A: Q.164, Y.243, L.250, Q.288, W.321, E.331, F.333 5 PLIP interactions: 5 interactions with chain A Water bridges: A:Q.164, A:Q.164, A:Q.164, A:W.321, A:E.331 EDO.3: 4 residues within 4Å: Chain A: Y.274, S.313, Y.314, N.315 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: I.81, D.82, T.84, R.138 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.84 Water bridges: A:I.81, A:T.84, A:T.84, A:G.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Glasgow, E.M. et al., A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis. J.Biol.Chem. (2020)

Release Date

2020-11-18

Peptides

Endoglucanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endoglucanase

Related Entries With Identical Sequence