- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- monomer
- Ligands
- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x B12: COBALAMIN(Non-covalent)
- 11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 3 residues within 4Å:- Chain A: Y.118, F.465, G.469
3 PLIP interactions:3 interactions with chain A- Water bridges: A:A.114, A:Y.118, A:R.461
EDO.4: 4 residues within 4Å:- Chain A: R.95, L.96, T.97, D.98
1 PLIP interactions:1 interactions with chain A- Water bridges: A:D.98
EDO.5: 5 residues within 4Å:- Chain A: Y.229, L.276, S.277, I.278, P.313
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.277, A:I.278
- Water bridges: A:Y.229, A:A.279
EDO.6: 4 residues within 4Å:- Chain A: K.12, R.80, F.82, E.85
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.80
- Water bridges: A:K.12
EDO.7: 7 residues within 4Å:- Chain A: L.168, T.169, Q.176, P.177, A.178, E.185, P.186
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.169, A:Q.176
- Water bridges: A:T.169
EDO.8: 5 residues within 4Å:- Chain A: P.383, M.419, E.422, I.423, Q.426
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.426, A:Q.426
EDO.9: 2 residues within 4Å:- Chain A: L.373, T.403
No protein-ligand interaction detected (PLIP)EDO.10: 3 residues within 4Å:- Chain A: F.184, R.230, I.421
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.230
EDO.11: 4 residues within 4Å:- Chain A: T.353, Y.354, Y.355, T.356
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.353, A:T.353, A:Y.354, A:Y.355
EDO.12: 4 residues within 4Å:- Chain A: P.387, V.390, D.501, L.502
No protein-ligand interaction detected (PLIP)EDO.13: 5 residues within 4Å:- Chain A: E.524, N.532, F.534, W.551, R.554
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.524, A:N.532, A:N.532
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Knox, H.L. et al., Structural basis for non-radical catalysis by TsrM, a radical SAM methylase. Nat.Chem.Biol. (2021)
- Release Date
- 2020-12-23
- Peptides
- B12-binding domain-containing protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- monomer
- Ligands
- 1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 1 x B12: COBALAMIN(Non-covalent)
- 11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Knox, H.L. et al., Structural basis for non-radical catalysis by TsrM, a radical SAM methylase. Nat.Chem.Biol. (2021)
- Release Date
- 2020-12-23
- Peptides
- B12-binding domain-containing protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A