SMTL ID : 6wtp.1

Human JAK2 JH1 domain in complex with PROTAC-intermediate linker handle 3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x U8P: tert-butyl 4-[(4-{1-[3-(cyanomethyl)-1-(ethylsulfonyl)azetidin-3-yl]-1H-pyrazol-4-yl}-7H-pyrrolo[2,3-d]pyrimidin-2-yl)amino]benzoate(Non-covalent)

U8P.1: 21 residues within 4Å: Chain A: L.22, G.23, K.24, G.25, G.28, S.29, V.30, A.47, K.49, M.96, E.97, Y.98, L.99, P.100, G.102, D.106, R.147, N.148, L.150, G.160, D.161 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.22, A:L.22, A:V.30, A:Y.98, A:L.150, A:L.150 Hydrogen bonds: A:V.30, A:E.97, A:L.99, A:L.99, A:G.102 Salt bridges: A:D.161

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: Q.109, E.219, K.220, S.221 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.109, A:K.220, A:S.221, A:S.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, Y. et al., Degradation of Janus kinases in CRLF2-rearranged acute lymphoblastic leukemia. Blood (2021)

Release Date

2021-05-05

Peptides

Tyrosine-protein kinase JAK2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase JAK2

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