SMTL ID : 6wtq.1

Human JAK2 JH1 domain in complex with PROTAC-intermediate linker handle 4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x U8J: N-methyl-4-{[4-(1-propyl-1H-pyrazol-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-2-yl]amino}benzamide(Non-covalent)

U8J.1: 15 residues within 4Å: Chain A: L.22, G.23, V.30, A.47, V.78, M.96, E.97, Y.98, L.99, P.100, G.102, R.147, N.148, L.150, D.161 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.22, A:V.30, A:Y.98, A:L.150 Hydrogen bonds: A:E.97, A:L.99, A:L.99

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.2: 3 residues within 4Å: Chain A: E.219, K.220, S.221 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.109, A:K.220, A:K.220, A:S.221, A:S.221

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: Y.188, S.192, L.193 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, Y. et al., Degradation of Janus kinases in CRLF2-rearranged acute lymphoblastic leukemia. Blood (2021)

Release Date

2021-05-05

Peptides

Tyrosine-protein kinase JAK2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase JAK2

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