SMTL ID : 6wue.1

Tetragonal crystal form of SbtB from Synechocystis PCC6803

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 7 residues within 4Å: Chain A: D.25, A.29, K.30, G.31 Chain B: K.14, L.17, N.36 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.14, B:N.36 IPA.2: 6 residues within 4Å: Chain A: K.14, N.36 Chain B: D.25, A.29, K.30, G.31 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.14, A:K.14, A:N.36 IPA.4: 7 residues within 4Å: Chain C: D.25, A.29, K.30, G.31 Chain D: K.14, L.17, N.36 3 PLIP interactions: 2 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:K.14, D:N.36, C:D.25 IPA.5: 6 residues within 4Å: Chain C: K.14, N.36 Chain D: D.25, A.29, K.30, G.31 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:K.14, C:K.14, C:N.36, D:D.25

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain B: K.82, Y.83, F.84, N.85, D.86 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Y.83, B:N.85, B:D.86 Water bridges: B:N.85, B:D.86 NA.6: 5 residues within 4Å: Chain D: K.82, Y.83, F.84, N.85, D.86 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:Y.83, D:N.85, D:D.86 Water bridges: D:N.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bu, G. et al., Tetragonal crystal form of the cyanobacterial bicarbonate-transporter regulator SbtB from Synechocystis sp. PCC 6803. Acta Crystallogr.,Sect.F (2020)

Release Date

2020-08-26

Peptides

Membrane-associated protein slr1513: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Membrane-associated protein slr1513

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