SMTL ID : 6wuk.1

Crystal structure of mouse DXO in complex with CoA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x COA: COENZYME A(Non-covalent)

COA.1: 15 residues within 4Å: Chain A: R.78, R.115, E.117, W.151, R.152, G.153, E.184, E.186, M.205, Y.209, G.253, Q.254, Q.273, K.275, Q.300 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:W.151 Hydrogen bonds: A:R.78, A:R.115, A:R.115, A:E.117, A:G.153, A:Y.209, A:Y.209, A:Q.254, A:Q.273, A:Q.300 Water bridges: A:R.78, A:E.121, A:R.122, A:R.152 Salt bridges: A:R.152, A:R.152, A:K.275 pi-Cation interactions: A:R.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Doamekpor, S.K. et al., DXO/Rai1 enzymes remove 5'-end FAD and dephospho-CoA caps on RNAs. Nucleic Acids Res. (2020)

Release Date

2020-05-20

Peptides

Decapping and exoribonuclease protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Decapping and exoribonuclease protein

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