SMTL ID : 6wv5.1

Human VKOR C43S mutant with vitamin K1 epoxide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x UAV: (2R,3R)-2-hydroxy-3-methyl-2-[(2E,7S)-3,7,11,15-tetramethylhexadec-2-en-1-yl]-2,3-dihydronaphthalene-1,4-dione(Non-covalent)

UAV.1: 27 residues within 4Å: Chain A: G.159, L.162, S.163, A.166, V.194, S.197, W.199, G.200, F.203, N.220, S.221, F.223, G.224, F.227, Y.228, V.252, S.253, G.256, S.257, L.260, I.263, L.264, L.268, C.275, T.278, Y.279, N.282 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.194, A:W.199, A:F.203, A:L.260, A:L.264, A:Y.279 Hydrogen bonds: A:N.220, A:Y.279

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, S. et al., Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation. Science (2021)

Release Date

2020-11-11

Peptides

Vitamin K epoxide reductase Cys43Ser mutant, termini restrained by green fluorescent protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Vitamin K epoxide reductase Cys43Ser mutant, termini restrained by green fluorescent protein

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