SMTL ID : 6wxm.2 (3 other biounits)

X-ray crystallographic structure of a beta-hairpin peptide derived from amyloid beta 16-36

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

6 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.1: 9 residues within 4Å: Chain A: C.8, E.9, D.10, G.16, A.17, C.18 Chain C: L.4, V.5, F.6 No protein-ligand interaction detected (PLIP) HEZ.2: 5 residues within 4Å: Chain A: L.4, F.6, G.20, L.21, M.22 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:M.22 HEZ.3: 9 residues within 4Å: Chain B: C.8, E.9, D.10, G.16, A.17, C.18 Chain D: L.4, V.5, F.6 No protein-ligand interaction detected (PLIP) HEZ.4: 5 residues within 4Å: Chain B: L.4, F.6, G.20, L.21, M.22 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:M.22 HEZ.5: 9 residues within 4Å: Chain A: K.3, L.4, F.6 Chain C: C.8, E.9, D.10, G.16, A.17, C.18 No protein-ligand interaction detected (PLIP) HEZ.6: 9 residues within 4Å: Chain B: K.3, L.4, F.6 Chain D: C.8, E.9, D.10, G.16, A.17, C.18 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kreutzer, A.G. et al., X-ray Crystallography Reveals Parallel and Antiparallel beta-Sheet Dimers of a beta-Hairpin Derived from A beta16-36that Assemble to Form Different Tetramers. Acs Chem Neurosci (2020)

Release Date

2020-07-08

Peptides

Amyloid-beta protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
J

B
J

C
I

D
I

Amyloid-beta protein

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