SMTL ID : 6wyh.1

Crystal structure of Human H-chain Ferritin variant 157C Delta C-star Modified with a RAFT Agent Soaked in an Acrylate Solution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

homo-24-mer

Ligands

60 x FE: FE (III) ION(Non-covalent)

FE.1: 4 residues within 4Å: Chain A: E.27, E.62, H.65 Ligands: FE.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.27, A:E.62 FE.2: 5 residues within 4Å: Chain A: E.62, E.107, Q.141 Ligands: FE.1, FE.4 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.62, A:E.107 FE.3: 6 residues within 4Å: Chain A: L.169, H.173 Chain B: H.173 Chain C: H.173 Chain D: L.169, H.173 No protein-ligand interaction detected (PLIP) FE.4: 3 residues within 4Å: Chain A: E.62, E.107 Ligands: FE.2 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.62, H2O.7 FE.6: 5 residues within 4Å: Chain B: E.27, E.62, H.65, Q.141 Ligands: FE.7 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.27, B:E.62, H2O.11 FE.7: 4 residues within 4Å: Chain B: E.62, E.107, Q.141 Ligands: FE.6 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.107, B:E.107, H2O.9, H2O.11, H2O.11 FE.12: 4 residues within 4Å: Chain C: E.27, E.62, H.65 Ligands: FE.13 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.27, C:E.62, C:E.62, C:H.65, H2O.16 FE.13: 4 residues within 4Å: Chain C: E.62, E.107, Q.141 Ligands: FE.12 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.62, H2O.16, H2O.17 FE.17: 5 residues within 4Å: Chain D: E.27, E.62, H.65, Q.141 Ligands: FE.18 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.27, D:E.62, D:H.65 FE.18: 4 residues within 4Å: Chain D: E.62, E.107, Q.141 Ligands: FE.17 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:E.62, D:E.107 FE.22: 4 residues within 4Å: Chain E: E.27, E.62, H.65 Ligands: FE.23 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:E.27, E:E.62 FE.23: 5 residues within 4Å: Chain E: E.62, E.107, Q.141 Ligands: FE.22, FE.25 2 PLIP interactions: 2 interactions with chain E Metal complexes: E:E.62, E:E.107 FE.24: 6 residues within 4Å: Chain E: L.169, H.173 Chain F: H.173 Chain G: H.173 Chain H: L.169, H.173 No protein-ligand interaction detected (PLIP) FE.25: 3 residues within 4Å: Chain E: E.62, E.107 Ligands: FE.23 2 PLIP interactions: 1 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:E.62, H2O.33 FE.27: 5 residues within 4Å: Chain F: E.27, E.62, H.65, Q.141 Ligands: FE.28 3 PLIP interactions: 2 interactions with chain F, 1 Ligand-Water interactions Metal complexes: F:E.27, F:E.62, H2O.37 FE.28: 4 residues within 4Å: Chain F: E.62, E.107, Q.141 Ligands: FE.27 5 PLIP interactions: 2 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:E.107, F:E.107, H2O.35, H2O.37, H2O.38 FE.33: 4 residues within 4Å: Chain G: E.27, E.62, H.65 Ligands: FE.34 5 PLIP interactions: 4 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:E.27, G:E.62, G:E.62, G:H.65, H2O.42 FE.34: 4 residues within 4Å: Chain G: E.62, E.107, Q.141 Ligands: FE.33 3 PLIP interactions: 1 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.62, H2O.42, H2O.44 FE.38: 5 residues within 4Å: Chain H: E.27, E.62, H.65, Q.141 Ligands: FE.39 3 PLIP interactions: 3 interactions with chain H Metal complexes: H:E.27, H:E.62, H:H.65 FE.39: 4 residues within 4Å: Chain H: E.62, E.107, Q.141 Ligands: FE.38 2 PLIP interactions: 2 interactions with chain H Metal complexes: H:E.62, H:E.107 FE.43: 4 residues within 4Å: Chain I: E.27, E.62, H.65 Ligands: FE.44 2 PLIP interactions: 2 interactions with chain I Metal complexes: I:E.27, I:E.62 FE.44: 5 residues within 4Å: Chain I: E.62, E.107, Q.141 Ligands: FE.43, FE.46 2 PLIP interactions: 2 interactions with chain I Metal complexes: I:E.62, I:E.107 FE.45: 6 residues within 4Å: Chain I: L.169, H.173 Chain J: H.173 Chain K: H.173 Chain L: L.169, H.173 No protein-ligand interaction detected (PLIP) FE.46: 3 residues within 4Å: Chain I: E.62, E.107 Ligands: FE.44 2 PLIP interactions: 1 interactions with chain I, 1 Ligand-Water interactions Metal complexes: I:E.62, H2O.60 FE.48: 5 residues within 4Å: Chain J: E.27, E.62, H.65, Q.141 Ligands: FE.49 3 PLIP interactions: 2 interactions with chain J, 1 Ligand-Water interactions Metal complexes: J:E.27, J:E.62, H2O.64 FE.49: 4 residues within 4Å: Chain J: E.62, E.107, Q.141 Ligands: FE.48 5 PLIP interactions: 2 interactions with chain J, 3 Ligand-Water interactions Metal complexes: J:E.107, J:E.107, H2O.62, H2O.64, H2O.65 FE.54: 4 residues within 4Å: Chain K: E.27, E.62, H.65 Ligands: FE.55 5 PLIP interactions: 4 interactions with chain K, 1 Ligand-Water interactions Metal complexes: K:E.27, K:E.62, K:E.62, K:H.65, H2O.69 FE.55: 4 residues within 4Å: Chain K: E.62, E.107, Q.141 Ligands: FE.54 3 PLIP interactions: 1 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:E.62, H2O.69, H2O.71 FE.59: 5 residues within 4Å: Chain L: E.27, E.62, H.65, Q.141 Ligands: FE.60 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:E.27, L:E.62, L:H.65 FE.60: 4 residues within 4Å: Chain L: E.62, E.107, Q.141 Ligands: FE.59 2 PLIP interactions: 2 interactions with chain L Metal complexes: L:E.62, L:E.107 FE.64: 4 residues within 4Å: Chain M: E.27, E.62, H.65 Ligands: FE.65 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:E.27, M:E.62 FE.65: 5 residues within 4Å: Chain M: E.62, E.107, Q.141 Ligands: FE.64, FE.67 2 PLIP interactions: 2 interactions with chain M Metal complexes: M:E.62, M:E.107 FE.66: 6 residues within 4Å: Chain M: L.169, H.173 Chain N: H.173 Chain O: H.173 Chain P: L.169, H.173 No protein-ligand interaction detected (PLIP) FE.67: 3 residues within 4Å: Chain M: E.62, E.107 Ligands: FE.65 2 PLIP interactions: 1 interactions with chain M, 1 Ligand-Water interactions Metal complexes: M:E.62, H2O.87 FE.69: 5 residues within 4Å: Chain N: E.27, E.62, H.65, Q.141 Ligands: FE.70 3 PLIP interactions: 2 interactions with chain N, 1 Ligand-Water interactions Metal complexes: N:E.27, N:E.62, H2O.91 FE.70: 4 residues within 4Å: Chain N: E.62, E.107, Q.141 Ligands: FE.69 5 PLIP interactions: 2 interactions with chain N, 3 Ligand-Water interactions Metal complexes: N:E.107, N:E.107, H2O.89, H2O.91, H2O.91 FE.75: 4 residues within 4Å: Chain O: E.27, E.62, H.65 Ligands: FE.76 5 PLIP interactions: 4 interactions with chain O, 1 Ligand-Water interactions Metal complexes: O:E.27, O:E.62, O:E.62, O:H.65, H2O.96 FE.76: 4 residues within 4Å: Chain O: E.62, E.107, Q.141 Ligands: FE.75 3 PLIP interactions: 1 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.62, H2O.96, H2O.97 FE.80: 5 residues within 4Å: Chain P: E.27, E.62, H.65, Q.141 Ligands: FE.81 3 PLIP interactions: 3 interactions with chain P Metal complexes: P:E.27, P:E.62, P:H.65 FE.81: 4 residues within 4Å: Chain P: E.62, E.107, Q.141 Ligands: FE.80 2 PLIP interactions: 2 interactions with chain P Metal complexes: P:E.62, P:E.107 FE.85: 4 residues within 4Å: Chain Q: E.27, E.62, H.65 Ligands: FE.86 2 PLIP interactions: 2 interactions with chain Q Metal complexes: Q:E.27, Q:E.62 FE.86: 5 residues within 4Å: Chain Q: E.62, E.107, Q.141 Ligands: FE.85, FE.88 2 PLIP interactions: 2 interactions with chain Q Metal complexes: Q:E.62, Q:E.107 FE.87: 6 residues within 4Å: Chain Q: L.169, H.173 Chain R: H.173 Chain S: H.173 Chain T: L.169, H.173 No protein-ligand interaction detected (PLIP) FE.88: 3 residues within 4Å: Chain Q: E.62, E.107 Ligands: FE.86 2 PLIP interactions: 1 interactions with chain Q, 1 Ligand-Water interactions Metal complexes: Q:E.62, H2O.114 FE.90: 5 residues within 4Å: Chain R: E.27, E.62, H.65, Q.141 Ligands: FE.91 3 PLIP interactions: 2 interactions with chain R, 1 Ligand-Water interactions Metal complexes: R:E.27, R:E.62, H2O.117 FE.91: 4 residues within 4Å: Chain R: E.62, E.107, Q.141 Ligands: FE.90 5 PLIP interactions: 2 interactions with chain R, 3 Ligand-Water interactions Metal complexes: R:E.107, R:E.107, H2O.116, H2O.117, H2O.118 FE.96: 4 residues within 4Å: Chain S: E.27, E.62, H.65 Ligands: FE.97 5 PLIP interactions: 4 interactions with chain S, 1 Ligand-Water interactions Metal complexes: S:E.27, S:E.62, S:E.62, S:H.65, H2O.122 FE.97: 4 residues within 4Å: Chain S: E.62, E.107, Q.141 Ligands: FE.96 3 PLIP interactions: 1 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.62, H2O.122, H2O.124 FE.101: 5 residues within 4Å: Chain T: E.27, E.62, H.65, Q.141 Ligands: FE.102 3 PLIP interactions: 3 interactions with chain T Metal complexes: T:E.27, T:E.62, T:H.65 FE.102: 4 residues within 4Å: Chain T: E.62, E.107, Q.141 Ligands: FE.101 2 PLIP interactions: 2 interactions with chain T Metal complexes: T:E.62, T:E.107 FE.106: 4 residues within 4Å: Chain U: E.27, E.62, H.65 Ligands: FE.107 2 PLIP interactions: 2 interactions with chain U Metal complexes: U:E.27, U:E.62 FE.107: 5 residues within 4Å: Chain U: E.62, E.107, Q.141 Ligands: FE.106, FE.109 2 PLIP interactions: 2 interactions with chain U Metal complexes: U:E.62, U:E.107 FE.108: 6 residues within 4Å: Chain U: L.169, H.173 Chain V: H.173 Chain W: H.173 Chain X: L.169, H.173 No protein-ligand interaction detected (PLIP) FE.109: 3 residues within 4Å: Chain U: E.62, E.107 Ligands: FE.107 2 PLIP interactions: 1 interactions with chain U, 1 Ligand-Water interactions Metal complexes: U:E.62, H2O.140 FE.111: 5 residues within 4Å: Chain V: E.27, E.62, H.65, Q.141 Ligands: FE.112 3 PLIP interactions: 2 interactions with chain V, 1 Ligand-Water interactions Metal complexes: V:E.27, V:E.62, H2O.144 FE.112: 4 residues within 4Å: Chain V: E.62, E.107, Q.141 Ligands: FE.111 5 PLIP interactions: 2 interactions with chain V, 3 Ligand-Water interactions Metal complexes: V:E.107, V:E.107, H2O.142, H2O.144, H2O.145 FE.117: 4 residues within 4Å: Chain W: E.27, E.62, H.65 Ligands: FE.118 5 PLIP interactions: 4 interactions with chain W, 1 Ligand-Water interactions Metal complexes: W:E.27, W:E.62, W:E.62, W:H.65, H2O.149 FE.118: 4 residues within 4Å: Chain W: E.62, E.107, Q.141 Ligands: FE.117 3 PLIP interactions: 1 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:E.62, H2O.149, H2O.151 FE.122: 5 residues within 4Å: Chain X: E.27, E.62, H.65, Q.141 Ligands: FE.123 3 PLIP interactions: 3 interactions with chain X Metal complexes: X:E.27, X:E.62, X:H.65 FE.123: 4 residues within 4Å: Chain X: E.62, E.107, Q.141 Ligands: FE.122 2 PLIP interactions: 2 interactions with chain X Metal complexes: X:E.62, X:E.107

24 x RFT: butyl 1-{[2-(2,5-dioxopyrrolidin-1-yl)ethyl]amino}-2-methyl-1-oxopropan-2-yl carbonotrithioate(Covalent)

RFT.5: 4 residues within 4Å: Chain A: C.157 Chain B: D.45, E.94, G.164 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.94 RFT.11: 2 residues within 4Å: Chain B: C.157 Chain D: G.164 1 PLIP interactions: 1 interactions with chain D Water bridges: D:G.164 RFT.16: 1 residues within 4Å: Chain C: C.157 No protein-ligand interaction detected (PLIP) RFT.21: 1 residues within 4Å: Chain D: C.157 No protein-ligand interaction detected (PLIP) RFT.26: 4 residues within 4Å: Chain E: C.157 Chain F: D.45, E.94, G.164 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:E.94 RFT.32: 2 residues within 4Å: Chain F: C.157 Chain H: G.164 1 PLIP interactions: 1 interactions with chain H Water bridges: H:G.164 RFT.37: 1 residues within 4Å: Chain G: C.157 No protein-ligand interaction detected (PLIP) RFT.42: 1 residues within 4Å: Chain H: C.157 No protein-ligand interaction detected (PLIP) RFT.47: 4 residues within 4Å: Chain I: C.157 Chain J: D.45, E.94, G.164 1 PLIP interactions: 1 interactions with chain J Hydrogen bonds: J:E.94 RFT.53: 2 residues within 4Å: Chain J: C.157 Chain L: G.164 1 PLIP interactions: 1 interactions with chain L Water bridges: L:G.164 RFT.58: 1 residues within 4Å: Chain K: C.157 No protein-ligand interaction detected (PLIP) RFT.63: 1 residues within 4Å: Chain L: C.157 No protein-ligand interaction detected (PLIP) RFT.68: 4 residues within 4Å: Chain M: C.157 Chain N: D.45, E.94, G.164 1 PLIP interactions: 1 interactions with chain N Hydrogen bonds: N:E.94 RFT.74: 2 residues within 4Å: Chain N: C.157 Chain P: G.164 1 PLIP interactions: 1 interactions with chain P Water bridges: P:G.164 RFT.79: 1 residues within 4Å: Chain O: C.157 No protein-ligand interaction detected (PLIP) RFT.84: 1 residues within 4Å: Chain P: C.157 No protein-ligand interaction detected (PLIP) RFT.89: 4 residues within 4Å: Chain Q: C.157 Chain R: D.45, E.94, G.164 1 PLIP interactions: 1 interactions with chain R Hydrogen bonds: R:E.94 RFT.95: 2 residues within 4Å: Chain R: C.157 Chain T: G.164 1 PLIP interactions: 1 interactions with chain T Water bridges: T:G.164 RFT.100: 1 residues within 4Å: Chain S: C.157 No protein-ligand interaction detected (PLIP) RFT.105: 1 residues within 4Å: Chain T: C.157 No protein-ligand interaction detected (PLIP) RFT.110: 4 residues within 4Å: Chain U: C.157 Chain V: D.45, E.94, G.164 1 PLIP interactions: 1 interactions with chain V Hydrogen bonds: V:E.94 RFT.116: 2 residues within 4Å: Chain V: C.157 Chain X: G.164 1 PLIP interactions: 1 interactions with chain X Water bridges: X:G.164 RFT.121: 1 residues within 4Å: Chain W: C.157 No protein-ligand interaction detected (PLIP) RFT.126: 1 residues within 4Å: Chain X: C.157 No protein-ligand interaction detected (PLIP)

42 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.8: 2 residues within 4Å: Chain B: D.84 Chain N: Q.86 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.84 CA.9: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.10: 1 residues within 4Å: Chain B: D.89 No protein-ligand interaction detected (PLIP) CA.14: 7 residues within 4Å: Chain C: D.131, E.134 Chain J: D.131, E.134 Chain Q: D.131, E.134 Ligands: CA.15 5 PLIP interactions: 1 interactions with chain J, 2 interactions with chain Q, 2 interactions with chain C Metal complexes: J:E.134, Q:D.131, Q:E.134, C:D.131, C:E.134 CA.15: 4 residues within 4Å: Chain C: E.134 Chain J: E.134 Chain Q: E.134 Ligands: CA.14 5 PLIP interactions: 1 interactions with chain J, 2 interactions with chain Q, 2 Ligand-Water interactions Metal complexes: J:E.134, Q:E.134, Q:E.134, H2O.15, H2O.108 CA.19: 11 residues within 4Å: Chain D: D.131, E.134 Chain H: D.131, E.134 Chain L: D.131, E.134 Ligands: CA.20, CA.40, CA.41, CA.61, CA.62 5 PLIP interactions: 1 interactions with chain D, 1 interactions with chain H, 1 interactions with chain L, 2 Ligand-Water interactions Metal complexes: D:D.131, H:D.131, L:D.131, H2O.23, H2O.76 CA.20: 11 residues within 4Å: Chain D: D.131, E.134 Chain H: D.131, E.134 Chain L: D.131, E.134 Ligands: CA.19, CA.40, CA.41, CA.61, CA.62 5 PLIP interactions: 1 interactions with chain L, 1 interactions with chain H, 1 interactions with chain D, 2 Ligand-Water interactions Metal complexes: L:E.134, H:E.134, D:E.134, H2O.49, H2O.76 CA.29: 2 residues within 4Å: Chain F: D.84 Chain V: Q.86 1 PLIP interactions: 1 interactions with chain F Metal complexes: F:D.84 CA.30: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.31: 1 residues within 4Å: Chain F: D.89 No protein-ligand interaction detected (PLIP) CA.35: 7 residues within 4Å: Chain B: D.131, E.134 Chain G: D.131, E.134 Chain M: D.131, E.134 Ligands: CA.36 5 PLIP interactions: 2 interactions with chain G, 2 interactions with chain M, 1 interactions with chain B Metal complexes: G:D.131, G:E.134, M:D.131, M:E.134, B:E.134 CA.36: 4 residues within 4Å: Chain B: E.134 Chain G: E.134 Chain M: E.134 Ligands: CA.35 5 PLIP interactions: 2 interactions with chain M, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: M:E.134, M:E.134, B:E.134, H2O.42, H2O.82 CA.40: 11 residues within 4Å: Chain D: D.131, E.134 Chain H: D.131, E.134 Chain L: D.131, E.134 Ligands: CA.19, CA.20, CA.41, CA.61, CA.62 5 PLIP interactions: 1 interactions with chain H, 1 interactions with chain L, 1 interactions with chain D, 2 Ligand-Water interactions Metal complexes: H:D.131, L:D.131, D:D.131, H2O.23, H2O.76 CA.41: 11 residues within 4Å: Chain D: D.131, E.134 Chain H: D.131, E.134 Chain L: D.131, E.134 Ligands: CA.19, CA.20, CA.40, CA.61, CA.62 5 PLIP interactions: 1 interactions with chain H, 1 interactions with chain D, 1 interactions with chain L, 2 Ligand-Water interactions Metal complexes: H:E.134, D:E.134, L:E.134, H2O.49, H2O.76 CA.50: 2 residues within 4Å: Chain J: D.84 Chain R: Q.86 1 PLIP interactions: 1 interactions with chain J Metal complexes: J:D.84 CA.51: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.52: 1 residues within 4Å: Chain J: D.89 No protein-ligand interaction detected (PLIP) CA.56: 7 residues within 4Å: Chain F: D.131, E.134 Chain K: D.131, E.134 Chain U: D.131, E.134 Ligands: CA.57 5 PLIP interactions: 1 interactions with chain F, 2 interactions with chain U, 2 interactions with chain K Metal complexes: F:E.134, U:D.131, U:E.134, K:D.131, K:E.134 CA.57: 4 residues within 4Å: Chain F: E.134 Chain K: E.134 Chain U: E.134 Ligands: CA.56 5 PLIP interactions: 1 interactions with chain F, 2 interactions with chain U, 2 Ligand-Water interactions Metal complexes: F:E.134, U:E.134, U:E.134, H2O.69, H2O.135 CA.61: 11 residues within 4Å: Chain D: D.131, E.134 Chain H: D.131, E.134 Chain L: D.131, E.134 Ligands: CA.19, CA.20, CA.40, CA.41, CA.62 5 PLIP interactions: 1 interactions with chain L, 1 interactions with chain D, 1 interactions with chain H, 2 Ligand-Water interactions Metal complexes: L:D.131, D:D.131, H:D.131, H2O.23, H2O.76 CA.62: 11 residues within 4Å: Chain D: D.131, E.134 Chain H: D.131, E.134 Chain L: D.131, E.134 Ligands: CA.19, CA.20, CA.40, CA.41, CA.61 5 PLIP interactions: 1 interactions with chain L, 1 interactions with chain D, 1 interactions with chain H, 2 Ligand-Water interactions Metal complexes: L:E.134, D:E.134, H:E.134, H2O.49, H2O.76 CA.71: 2 residues within 4Å: Chain B: Q.86 Chain N: D.84 1 PLIP interactions: 1 interactions with chain N Metal complexes: N:D.84 CA.72: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.73: 1 residues within 4Å: Chain N: D.89 No protein-ligand interaction detected (PLIP) CA.77: 7 residues within 4Å: Chain E: D.131, E.134 Chain O: D.131, E.134 Chain V: D.131, E.134 Ligands: CA.78 5 PLIP interactions: 1 interactions with chain V, 2 interactions with chain O, 2 interactions with chain E Metal complexes: V:E.134, O:D.131, O:E.134, E:D.131, E:E.134 CA.78: 4 residues within 4Å: Chain E: E.134 Chain O: E.134 Chain V: E.134 Ligands: CA.77 5 PLIP interactions: 1 interactions with chain V, 2 interactions with chain E, 2 Ligand-Water interactions Metal complexes: V:E.134, E:E.134, E:E.134, H2O.28, H2O.95 CA.82: 11 residues within 4Å: Chain P: D.131, E.134 Chain T: D.131, E.134 Chain X: D.131, E.134 Ligands: CA.83, CA.103, CA.104, CA.124, CA.125 5 PLIP interactions: 1 interactions with chain X, 1 interactions with chain P, 1 interactions with chain T, 2 Ligand-Water interactions Metal complexes: X:D.131, P:D.131, T:D.131, H2O.103, H2O.129 CA.83: 11 residues within 4Å: Chain P: D.131, E.134 Chain T: D.131, E.134 Chain X: D.131, E.134 Ligands: CA.82, CA.103, CA.104, CA.124, CA.125 5 PLIP interactions: 1 interactions with chain P, 1 interactions with chain T, 1 interactions with chain X, 2 Ligand-Water interactions Metal complexes: P:E.134, T:E.134, X:E.134, H2O.102, H2O.156 CA.92: 2 residues within 4Å: Chain J: Q.86 Chain R: D.84 1 PLIP interactions: 1 interactions with chain R Metal complexes: R:D.84 CA.93: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.94: 1 residues within 4Å: Chain R: D.89 No protein-ligand interaction detected (PLIP) CA.98: 7 residues within 4Å: Chain A: D.131, E.134 Chain N: D.131, E.134 Chain S: D.131, E.134 Ligands: CA.99 5 PLIP interactions: 2 interactions with chain S, 1 interactions with chain N, 2 interactions with chain A Metal complexes: S:D.131, S:E.134, N:E.134, A:D.131, A:E.134 CA.99: 4 residues within 4Å: Chain A: E.134 Chain N: E.134 Chain S: E.134 Ligands: CA.98 5 PLIP interactions: 1 interactions with chain N, 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: N:E.134, A:E.134, A:E.134, H2O.1, H2O.122 CA.103: 11 residues within 4Å: Chain P: D.131, E.134 Chain T: D.131, E.134 Chain X: D.131, E.134 Ligands: CA.82, CA.83, CA.104, CA.124, CA.125 5 PLIP interactions: 1 interactions with chain T, 1 interactions with chain P, 1 interactions with chain X, 2 Ligand-Water interactions Metal complexes: T:D.131, P:D.131, X:D.131, H2O.103, H2O.129 CA.104: 11 residues within 4Å: Chain P: D.131, E.134 Chain T: D.131, E.134 Chain X: D.131, E.134 Ligands: CA.82, CA.83, CA.103, CA.124, CA.125 5 PLIP interactions: 1 interactions with chain X, 1 interactions with chain P, 1 interactions with chain T, 2 Ligand-Water interactions Metal complexes: X:E.134, P:E.134, T:E.134, H2O.102, H2O.156 CA.113: 2 residues within 4Å: Chain F: Q.86 Chain V: D.84 1 PLIP interactions: 1 interactions with chain V Metal complexes: V:D.84 CA.114: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.115: 1 residues within 4Å: Chain V: D.89 No protein-ligand interaction detected (PLIP) CA.119: 7 residues within 4Å: Chain I: D.131, E.134 Chain R: D.131, E.134 Chain W: D.131, E.134 Ligands: CA.120 5 PLIP interactions: 2 interactions with chain I, 2 interactions with chain W, 1 interactions with chain R Metal complexes: I:D.131, I:E.134, W:D.131, W:E.134, R:E.134 CA.120: 4 residues within 4Å: Chain I: E.134 Chain R: E.134 Chain W: E.134 Ligands: CA.119 5 PLIP interactions: 2 interactions with chain I, 1 interactions with chain R, 2 Ligand-Water interactions Metal complexes: I:E.134, I:E.134, R:E.134, H2O.55, H2O.149 CA.124: 11 residues within 4Å: Chain P: D.131, E.134 Chain T: D.131, E.134 Chain X: D.131, E.134 Ligands: CA.82, CA.83, CA.103, CA.104, CA.125 5 PLIP interactions: 1 interactions with chain P, 1 interactions with chain T, 1 interactions with chain X, 2 Ligand-Water interactions Metal complexes: P:D.131, T:D.131, X:D.131, H2O.103, H2O.129 CA.125: 11 residues within 4Å: Chain P: D.131, E.134 Chain T: D.131, E.134 Chain X: D.131, E.134 Ligands: CA.82, CA.83, CA.103, CA.104, CA.124 5 PLIP interactions: 1 interactions with chain P, 1 interactions with chain X, 1 interactions with chain T, 2 Ligand-Water interactions Metal complexes: P:E.134, X:E.134, T:E.134, H2O.102, H2O.156

Links

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Citation

Han, K. et al., Anisotropic Dynamics and Mechanics of Macromolecular Crystals Containing Lattice-Patterned Polymer Networks. J.Am.Chem.Soc. (2020)

Release Date

2020-11-11

Peptides

Ferritin heavy chain: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
A

F
B

G
C

H
D

I
A

J
B

K
C

L
D

M
A

N
B

O
C

P
D

Q
A

R
B

S
C

T
D

U
A

V
B

W
C

X
D

Ferritin heavy chain

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