SMTL ID : 6wzw.1

Ash1L SET domain in complex with AS-85

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 4 residues within 4Å: Chain A: E.201, K.202, Q.203 Ligands: UG7.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.203, A:Q.203 Salt bridges: A:K.202

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.2: 20 residues within 4Å: Chain A: E.87, K.88, G.89, W.90, S.129, D.130, H.131, Y.132, R.152, F.153, I.154, N.155, H.156, Y.193, Q.204, L.205, C.206, K.207, C.208, I.217 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:W.90, A:D.130, A:H.131, A:Y.132, A:N.155, A:H.156, A:H.156, A:Q.204, A:Q.204, A:K.207

3 x ZN: ZINC ION(Non-covalent)

ZN.3: 5 residues within 4Å: Chain A: C.29, C.31, C.42, C.46 Ligands: ZN.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.29, A:C.31, A:C.42, A:C.46 ZN.4: 5 residues within 4Å: Chain A: C.42, C.55, C.60, C.66 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.42, A:C.55, A:C.60, A:C.66 ZN.5: 4 residues within 4Å: Chain A: C.158, C.206, C.208, C.213 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.158, A:C.206, A:C.208, A:C.213

1 x UG7: N-{[3-(3-carbamothioylphenyl)-1-{1-[(trifluoromethyl)sulfonyl]piperidin-4-yl}-1H-indol-6-yl]methyl}azetidine-3-carboxamide(Non-covalent)

UG7.6: 19 residues within 4Å: Chain A: H.131, Y.132, C.133, N.135, Y.193, N.194, S.197, F.198, N.199, V.200, E.201, K.202, Q.203, Q.204, I.216, I.217, G.218, G.219 Ligands: EPE.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:H.131, A:Y.193, A:N.199, A:V.200, A:I.216, A:I.217 Hydrogen bonds: A:C.133, A:C.133, A:N.194, A:F.198, A:N.199 Water bridges: A:N.135, A:F.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rogawski, D.S. et al., Discovery of first-in-class inhibitors of ASH1L histone methyltransferase with anti-leukemic activity. Nat Commun (2021)

Release Date

2021-04-07

Peptides

Histone-lysine N-methyltransferase ASH1L: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase ASH1L

Related Entries With Identical Sequence