SMTL ID : 6x6e.1

Glucocorticoid Receptor DNA binding domain in complex with methylated precursor for a modern recognition element (methylated pre-GBS)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.5, C.8, C.22, C.25 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.5, A:C.8, A:C.22, A:C.25 ZN.2: 4 residues within 4Å: Chain A: C.41, C.47, C.57, C.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.41, A:C.47, A:C.57, A:C.60 ZN.3: 4 residues within 4Å: Chain B: C.5, C.8, C.22, C.25 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.5, B:C.8, B:C.22, B:C.25 ZN.4: 4 residues within 4Å: Chain B: C.41, C.47, C.57, C.60 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.41, B:C.47, B:C.57, B:C.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, X. et al., Structural basis for glucocorticoid receptor recognition of both unmodified and methylated binding sites, precursors of a modern recognition element. Nucleic Acids Res. (2021)

Release Date

2021-06-02

Peptides

Glucocorticoid receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucocorticoid receptor