SMTL ID : 6x8l.1

Caspase-7 in complex with elongated ketomethylene inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

hetero-2-2-mer

Ligands

2 x ACE- ASP- GLU- VAL- Y2Y- ALA- ALA- ALA: ketomethylene inhibitor(Non-covalent)

ACE-ASP-GLU-VAL-Y2Y-ALA-ALA-ALA.1: 18 residues within 4Å: Chain A: M.84, R.87, S.143, H.144, G.145, Q.184, C.186, T.189 Chain B: Y.32, S.33, W.34, R.35, S.36, P.37, W.42, E.76, S.77, Q.78 20 PLIP interactions: 7 interactions with chain A, 13 interactions with chain B Hydrophobic interactions: A:T.189, B:Y.32, B:Y.32, B:Y.32, B:W.34 Hydrogen bonds: A:H.144, A:G.145, A:Q.184, A:C.186, B:Y.32, B:S.33, B:R.35, B:R.35, B:R.35, B:Q.78, B:Q.78 Salt bridges: A:R.87, A:H.144, B:R.35, B:R.35 ACE-ASP-GLU-VAL-Y2Y-ALA-ALA-ALA.2: 18 residues within 4Å: Chain C: M.84, R.87, S.143, H.144, G.145, E.146, Q.184, C.186, T.189 Chain D: Y.32, S.33, W.34, R.35, S.36, P.37, W.42, S.77, Q.78 18 PLIP interactions: 6 interactions with chain C, 12 interactions with chain D Hydrogen bonds: C:H.144, C:G.145, C:Q.184, C:C.186, D:S.33, D:R.35, D:R.35, D:R.35, D:W.42, D:Q.78, D:Q.78 Salt bridges: C:R.87, C:H.144, D:R.35, D:R.35 Hydrophobic interactions: D:Y.32, D:W.34, D:W.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Solania, A. et al., Caspase-7 in complex with elongated ketomethylene inhibitor. To Be Published

Release Date

2021-06-02

Peptides

Caspase-7: AC
Caspase-7: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
C

D
D

Caspase-7

Caspase-7

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