SMTL ID : 6xbu.1

polymerase domain of polymerase-theta

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.29 Å

Oligo State

homo-dimer

Ligands

2 x DG3: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

DG3.1: 10 residues within 4Å: Chain A: D.401, E.406, K.454, Y.458, Y.462, N.541, Q.545 Chain B: G.13 Chain C: C.4, C.5 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:E.406 Hydrogen bonds: A:N.541, A:Q.545 Salt bridges: A:K.454 pi-Stacking: A:Y.462 pi-Cation interactions: A:Y.462 DG3.2: 10 residues within 4Å: Chain D: D.401, E.406, K.454, Y.458, Y.462, N.541, Q.545 Chain E: G.13 Chain F: C.4, C.5 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:E.406 Hydrogen bonds: D:Y.462, D:N.541, D:Q.545 Salt bridges: D:K.454 pi-Stacking: D:Y.462 pi-Cation interactions: D:Y.462

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chandramouly, G. et al., Pol theta reverse transcribes RNA and promotes RNA-templated DNA repair. Sci Adv (2021)

Release Date

2021-06-09

Peptides

DNA polymerase theta: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

DNA polymerase theta