SMTL ID : 6xcz.1

Porcine pepsin in complex with saquinavir

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

1 x ROC: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide(Non-covalent)

ROC.1: 19 residues within 4Å: Chain A: D.32, G.34, S.35, I.73, T.74, Y.75, G.76, T.77, F.111, L.112, F.117, I.128, Y.189, D.215, G.217, T.218, E.287, V.291, I.300 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:Y.75, A:Y.75, A:T.77, A:F.111, A:L.112, A:F.117, A:Y.189, A:T.218, A:V.291, A:I.300 Hydrogen bonds: A:G.34, A:G.34, A:G.34, A:T.74, A:T.74, A:G.76, A:T.77 Water bridges: A:T.74, A:G.217 Salt bridges: A:D.32, A:D.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vuksanovic, N. et al., Porcine pepsin in complex with saquinavir. To Be Published

Release Date

2021-06-16

Peptides

Pepsin A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pepsin A

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