SMTL ID : 6xd5.1

Apo KPC-2 N170A mutant at 1.20 A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: Q.204, V.207, K.211, A.229, W.250 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.204, A:K.211, A:K.211

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: S.69, S.129, K.233, T.234, G.235, T.236 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.69, A:S.129, A:R.219, A:T.234, A:T.234, A:T.236 Water bridges: A:T.236, A:T.236 Salt bridges: A:K.233 SO4.3: 3 residues within 4Å: Chain A: S.273, E.274, A.275 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.274, A:A.275 SO4.4: 2 residues within 4Å: Chain A: T.26, R.183 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.26, A:T.26 Water bridges: A:R.183 Salt bridges: A:R.183 SO4.5: 2 residues within 4Å: Chain A: T.252, G.253 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.253

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mehta, S.C. et al., KPC-2 beta-lactamase enables carbapenem antibiotic resistance through fast deacylation of the covalent intermediate. J.Biol.Chem. (2020)

Release Date

2020-12-09

Peptides

Carbapenem-hydrolyzing beta-lactamase KPC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbapenem-hydrolyzing beta-lactamase KPC

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