SMTL ID : 6xee.1

Crystal Structure of the PTP1B YopH WPD loop Chimera 4 apo form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.1: 5 residues within 4Å: Chain A: P.89, C.92, Q.123, I.134, F.135 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.135, A:F.135 Hydrogen bonds: A:Q.123 BEN.3: 5 residues within 4Å: Chain A: M.235, D.236, P.241, I.281, M.282 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.235, A:D.236, A:D.236

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 4 residues within 4Å: Chain A: Y.46, D.48, V.49, Q.262 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.262

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.4: 1 residues within 4Å: Chain A: H.54 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.54

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shen, R. et al., Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases. Chem Sci (2022)

Release Date

2021-12-15

Peptides

Tyrosine-protein phosphatase non-receptor type 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein phosphatase non-receptor type 1

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