SMTL ID : 6xeq.1

Crystal structure of the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidans

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: P.95, A.96, N.122 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.94, A:A.96, A:N.122 SO4.2: 2 residues within 4Å: Chain B: A.96, N.122 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:A.96, B:N.122 SO4.3: 3 residues within 4Å: Chain C: P.95, A.96, N.122 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:A.96, C:N.122 SO4.4: 3 residues within 4Å: Chain D: P.95, A.96, N.122 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:A.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maturana, P. et al., Crystal structure of the 6-phosphogluconate dehydrogenase from Gluconobacter oxydans reveals tetrameric 6PGDHs as the crucial intermediate in the evolution of structure and cofactor preference in the 6PGDH family [version 1; peer review: 1 approved, 1 approved with reservations]. Wellcome Open Res (2021)

Release Date

2020-12-02

Peptides

6-phosphogluconate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

6-phosphogluconate dehydrogenase