SMTL ID : 6xf3.1

Crystal structure of STING in complex with E7766

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

homo-dimer

Ligands

1 x V5V: (1R,3R,15E,28R,29R,30R,31R,34R,36R,39S,41R)-29,41-difluoro-34,39-disulfanyl-2,33,35,38,40,42-hexaoxa-4,6,9,11,13,18,20,22,25,27-decaaza-34,39-diphosphaoctacyclo[28.6.4.1~3,36~.1~28,31~.0~4,8~.0~7,12~.0~19,24~.0~23,27~]dotetraconta-5,7,9,11,15,19,21,23,25-nonaene 34,39-dioxide (non-preferred name)(Non-covalent)

V5V.1: 23 residues within 4Å: Chain A: S.10, Y.11, G.14, Y.15, R.80, I.83, R.86, V.87, Y.88, T.111, P.112 Chain B: S.10, Y.11, G.14, Y.15, R.80, I.83, R.86, V.87, Y.88, T.111, P.112, T.115 18 PLIP interactions: 9 interactions with chain B, 9 interactions with chain A Hydrogen bonds: B:V.87, A:R.80, A:R.86, A:V.87, A:T.115 Water bridges: B:S.10, B:S.10, B:R.80, B:R.86, B:R.86, B:S.89, B:S.89, A:S.10, A:R.86, A:S.89, A:S.89 pi-Stacking: B:Y.15, A:Y.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, D.S. et al., E7766, a Macrocycle-Bridged Stimulator of Interferon Genes (STING) Agonist with Potent Pan-Genotypic Activity. Chemmedchem (2021)

Release Date

2021-02-17

Peptides

Stimulator of interferon genes protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Stimulator of interferon genes protein

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