SMTL ID : 6xi8.1

Yeast TFIIK (Kin28/Ccl1/Tfb3) Complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 12 residues within 4Å: Chain B: V.19, L.81, E.82, F.83, L.84, D.127, K.129, N.131, N.132, L.134, D.145 Ligands: AF3.2 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:E.82, B:E.82, B:N.131, B:N.132, B:N.132 Salt bridges: B:K.129

1 x AF3: ALUMINUM FLUORIDE(Non-covalent)

AF3.2: 2 residues within 4Å: Chain B: N.131 Ligands: ADP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van Eeuwen, T. et al., Structure of TFIIK for phosphorylation of CTD of RNA polymerase II. Sci Adv (2021)

Release Date

2021-04-28

Peptides

RNA polymerase II transcription factor B subunit 3: A
Serine/threonine-protein kinase KIN28: B
Cyclin CCL1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
A

C
B

RNA polymerase II transcription factor B subunit 3

Serine/threonine-protein kinase KIN28

Cyclin CCL1