SMTL ID : 6xjj.1

Structure of non-heme iron enzyme TropC: Radical tropolone biosynthesis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x FE: FE (III) ION(Non-covalent)

FE.1: 4 residues within 4Å: Chain A: H.243, D.245, H.302, F.317 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.243, A:D.245, A:H.302, H2O.1

1 x YT3: YTTRIUM (III) ION(Non-covalent)

YT3.2: 2 residues within 4Å: Chain A: P.149, D.151 No protein-ligand interaction detected (PLIP)

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 4 residues within 4Å: Chain A: T.244, D.287, H.290, S.299 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.290

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Doyon, T.J. et al., Radical Tropolone Biosynthesis. Chemrxiv (2020)

Release Date

2021-06-02

Peptides

2-oxoglutarate-dependent dioxygenase tropC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

2-oxoglutarate-dependent dioxygenase tropC