SMTL ID : 6xnj.1

Crystal structure of the PDZ domain of human GOPC in complex with a peptide of E. coli O157:H7 str. Sakai effector NleG8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: H.52 5 PLIP interactions: 5 interactions with chain A Water bridges: A:H.52, A:H.52, A:H.52, A:V.53 Salt bridges: A:H.52 SO4.2: 3 residues within 4Å: Chain A: H.40, P.41 Chain B: R.9 7 PLIP interactions: 2 interactions with chain A, 5 interactions with chain B Water bridges: A:H.40, B:R.9, B:R.9, B:R.9, B:R.9 Salt bridges: A:H.40, B:R.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Popov, G., Crystal structure of the PDZ domain of human GOPC in complex with a peptide of E. coli O157:H7 str. Sakai effector NleG8. To Be Published

Release Date

2020-08-12

Peptides

Golgi-associated PDZ and coiled-coil motif-containing protein: A
NleG8 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Golgi-associated PDZ and coiled-coil motif-containing protein

NleG8 peptide