SMTL ID : 6xrx.1

Crystal structure of the mosquito protein AZ1 as an MBP fusion

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 16 residues within 4Å: Chain A: N.12, D.14, K.15, W.62, A.63, D.65, R.66, E.111, E.153, P.154, Y.155, F.156, W.230, M.330, W.340, R.344 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.62, A:R.66, A:R.66, A:Y.155, A:R.344 Water bridges: A:D.65

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 1 residues within 4Å: Chain A: T.193 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.193 NA.3: 1 residues within 4Å: Chain A: A.82 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.82, A:E.281 Water bridges: A:T.80

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 6 residues within 4Å: Chain A: A.96, Y.176, I.329, M.330, P.331, N.332 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.64, A:N.332 Water bridges: A:Y.176, A:Y.176, A:N.332, A:N.332

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 3 residues within 4Å: Chain A: N.150, D.209, Y.210 Ligand excluded by PLIP CL.6: 1 residues within 4Å: Chain A: A.440 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Foo, A.C.Y. et al., The mosquito protein AEG12 displays both cytolytic and antiviral properties via a common lipid transfer mechanism. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-03-24

Peptides

Maltose/maltodextrin-binding periplasmic protein, Mosquito protein AZ1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose/maltodextrin-binding periplasmic protein, Mosquito protein AZ1