SMTL ID : 6xxn.3 (7 other biounits)

Crystal structure of NB7, a nanobody targeting prostate specific membrane antigen

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: Y.33, C.101, H.102, F.103, C.104, D.105 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.33, A:H.102, A:F.103, A:C.104, A:D.105 SO4.2: 5 residues within 4Å: Chain A: N.52, S.57, S.59, S.106, L.107 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.52, A:S.57, A:S.57, A:S.59, A:S.106, A:L.107 SO4.3: 3 residues within 4Å: Chain A: T.110, Q.111, D.112 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.111, A:Q.111, A:D.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rosenfeld, L. et al., Nanobodies Targeting Prostate-Specific Membrane Antigen for the Imaging and Therapy of Prostate Cancer. J.Med.Chem. (2020)

Release Date

2020-06-10

Peptides

NB_7_a,b,c,f: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

NB_7_a,b,c,f

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