SMTL ID : 6y01.1

The structure of the molybdenum cofactor binding protein from the phototrophic bacterium Rippkaea orientalis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

homo-tetramer

Ligands

2 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 2 residues within 4Å: Chain A: K.15, L.72 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain C pi-Cation interactions: A:K.15 Water bridges: C:D.90 IMD.5: 1 residues within 4Å: Chain B: V.175 No protein-ligand interaction detected (PLIP)

10 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: R.54, R.101 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: R.54, P.78, S.79, N.84 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain A: P.23, G.118, L.119, G.120, T.121 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain B: R.54, R.101 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain B: R.54, P.78, S.79, N.84 Ligand excluded by PLIP CL.8: 5 residues within 4Å: Chain B: P.23, G.118, L.119, G.120, T.121 Ligand excluded by PLIP CL.9: 2 residues within 4Å: Chain C: R.54, R.101 Ligand excluded by PLIP CL.10: 4 residues within 4Å: Chain C: R.54, P.78, S.79, N.84 Ligand excluded by PLIP CL.11: 5 residues within 4Å: Chain C: P.23, G.118, L.119, G.120, T.121 Ligand excluded by PLIP CL.12: 5 residues within 4Å: Chain D: P.23, G.118, L.119, G.120, T.121 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Krausze, J. et al., The structure of the Moco carrier protein from Rippkaea orientalis. Acta Crystallogr.,Sect.F (2020)

Release Date

2020-09-16

Peptides

p450 cytochrome, putative: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

C
CCC

D
DDD

p450 cytochrome, putative