- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MSS: (MOLYBDOPTERIN-S,S)-OXO-MOLYBDENUM(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 4 residues within 4Å:- Chain A: H.155, K.214, E.216
- Ligands: PO4.6
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:H.155
- Water bridges: A:F.217
GOL.3: 6 residues within 4Å:- Chain A: V.96, R.133, H.176, P.201, F.324
- Ligands: PO4.7
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.133, A:H.176
- Water bridges: A:R.133
GOL.4: 2 residues within 4Å:- Chain A: R.286, E.288
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.328
- Water bridges: A:E.288, A:E.288, A:R.328
GOL.9: 2 residues within 4Å:- Chain A: H.172
- Chain B: L.244
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Water bridges: A:H.172, B:Q.246, B:Q.246
GOL.11: 4 residues within 4Å:- Chain B: H.155, K.214, E.216
- Ligands: PO4.15
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:H.155, B:E.216
- Water bridges: B:F.217
GOL.12: 6 residues within 4Å:- Chain B: V.96, R.133, H.176, P.201, F.324
- Ligands: PO4.16
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.133
- Water bridges: B:R.133
GOL.13: 2 residues within 4Å:- Chain B: R.286, E.288
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:R.328
- Water bridges: B:E.288, B:E.288, B:R.328
GOL.18: 2 residues within 4Å:- Chain A: L.244
- Chain B: H.172
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Water bridges: B:H.172, A:Q.246, A:Q.246
- 8 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.5: 6 residues within 4Å:- Chain A: H.155, R.158, E.164, V.166, K.214
- Ligands: PO4.6
7 PLIP interactions:7 interactions with chain A- Water bridges: A:A.156, A:R.158, A:R.158, A:K.214
- Salt bridges: A:H.155, A:R.158, A:K.214
PO4.6: 7 residues within 4Å:- Chain A: T.153, H.155, V.166, N.222, T.224
- Ligands: GOL.2, PO4.5
3 PLIP interactions:3 interactions with chain A- Water bridges: A:T.223, A:T.223
- Salt bridges: A:H.155
PO4.7: 6 residues within 4Å:- Chain A: V.96, T.97, S.323, F.324, G.325
- Ligands: GOL.3
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:T.97, A:S.323, A:F.324, A:G.325
- Water bridges: A:T.97, A:T.97, A:S.323
PO4.8: 9 residues within 4Å:- Chain A: R.50, C.102, G.104, R.107, N.117, W.119, Y.231, Y.367
- Ligands: MSS.1
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:G.104, A:N.117, A:Y.231, A:Y.231
- Water bridges: A:N.117, A:R.230
- Salt bridges: A:R.50, A:R.107
PO4.14: 6 residues within 4Å:- Chain B: H.155, R.158, E.164, V.166, K.214
- Ligands: PO4.15
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:E.164
- Water bridges: B:H.155, B:A.156, B:R.158, B:R.158, B:K.214
- Salt bridges: B:H.155, B:R.158, B:K.214
PO4.15: 7 residues within 4Å:- Chain B: T.153, H.155, V.166, N.222, T.224
- Ligands: GOL.11, PO4.14
3 PLIP interactions:3 interactions with chain B- Water bridges: B:T.223, B:T.223
- Salt bridges: B:H.155
PO4.16: 6 residues within 4Å:- Chain B: V.96, T.97, S.323, F.324, G.325
- Ligands: GOL.12
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:T.97, B:S.323, B:F.324, B:G.325
- Water bridges: B:T.97, B:S.323
PO4.17: 9 residues within 4Å:- Chain B: R.50, C.102, G.104, R.107, N.117, W.119, Y.231, Y.367
- Ligands: MSS.10
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:G.104, B:N.117, B:Y.231, B:Y.231
- Water bridges: B:N.117, B:R.230, B:Y.367
- Salt bridges: B:R.50, B:R.107
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Djeghader, A. et al., Structural evidence for a reaction intermediate mimic in the active site of a sulfite dehydrogenase. Chem.Commun.(Camb.) (2020)
- Release Date
- 2020-08-05
- Peptides
- Putaitve sulfite oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAAB
AAA
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MSS: (MOLYBDOPTERIN-S,S)-OXO-MOLYBDENUM(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 8 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Djeghader, A. et al., Structural evidence for a reaction intermediate mimic in the active site of a sulfite dehydrogenase. Chem.Commun.(Camb.) (2020)
- Release Date
- 2020-08-05
- Peptides
- Putaitve sulfite oxidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAAB
AAA