- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
DMS.1: 9 residues within 4Å:- Chain A: G.202, L.203, G.263, G.264, L.267, I.272, T.293, V.294, I.295
No protein-ligand interaction detected (PLIP)DMS.2: 8 residues within 4Å:- Chain A: K.12, E.36, V.54, E.88, L.89
- Chain B: N.22, R.26
- Ligands: DMS.11
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Salt bridges: A:E.36
- Hydrogen bonds: B:N.22, B:R.26
DMS.3: 6 residues within 4Å:- Chain A: R.119, E.153, C.155, D.156, G.217, G.219
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.119, A:R.119
DMS.4: 8 residues within 4Å:- Chain A: I.214, M.215, A.218, G.256, V.257, L.258, I.308, A.310
No protein-ligand interaction detected (PLIP)DMS.5: 7 residues within 4Å:- Chain A: D.53, V.54, K.55
- Chain B: N.25, M.49, S.50, D.51
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Water bridges: B:M.49
- Salt bridges: B:D.51
- Hydrogen bonds: A:K.55
DMS.7: 8 residues within 4Å:- Chain B: G.202, L.203, G.263, G.264, L.267, T.293, V.294, I.295
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:L.203
DMS.8: 4 residues within 4Å:- Chain B: I.198, P.201, N.205, V.206
1 PLIP interactions:1 interactions with chain B- Water bridges: B:V.206
DMS.9: 1 residues within 4Å:- Chain B: N.205
No protein-ligand interaction detected (PLIP)DMS.10: 4 residues within 4Å:- Chain B: A.93, D.94, G.122, K.212
1 PLIP interactions:1 interactions with chain B- Salt bridges: B:D.94
DMS.11: 6 residues within 4Å:- Chain A: E.36
- Chain B: N.22, N.25, R.26, E.29
- Ligands: DMS.2
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Water bridges: B:N.25
- Salt bridges: B:E.29, A:E.36
DMS.12: 4 residues within 4Å:- Chain B: T.220, S.250, A.309, G.311
No protein-ligand interaction detected (PLIP)DMS.13: 4 residues within 4Å:- Chain B: K.33, T.199, T.200, P.201
No protein-ligand interaction detected (PLIP)- 1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)
GSP.6: 23 residues within 4Å:- Chain A: G.17, G.18, G.19, N.22, N.41, T.42, G.67, A.68, G.69, A.70, G.101, E.102, G.104, G.105, T.106, G.107, P.132, E.136, R.140, F.180, A.183, D.184, L.187
23 PLIP interactions:23 interactions with chain A- Hydrogen bonds: A:G.18, A:G.19, A:N.22, A:T.42, A:A.68, A:A.70, A:G.105, A:T.106, A:T.106, A:T.106, A:G.107, A:E.136, A:R.140, A:R.140, A:N.163, A:F.180
- Water bridges: A:N.41, A:N.41, A:G.104, A:T.108, A:T.130
- Salt bridges: A:D.184
- pi-Stacking: A:F.180
- 1 x 4HC: 4-HYDROXY-2H-CHROMEN-2-ONE(Non-covalent)
4HC.14: 9 residues within 4Å:- Chain B: A.39, N.41, L.47, L.48, M.49, S.50, K.55, L.56, D.57
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:A.39, B:N.41, B:L.47, B:K.55, B:K.55, B:D.57
- Hydrogen bonds: B:S.50
- Salt bridges: B:K.55
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Alnami, A. et al., Conformational Flexibility of A Highly Conserved Helix Controls Cryptic Pocket Formation in FtsZ. J.Mol.Biol. (2021)
- Release Date
- 2021-06-09
- Peptides
- Cell division protein FtsZ: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- 1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)
- 1 x 4HC: 4-HYDROXY-2H-CHROMEN-2-ONE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Alnami, A. et al., Conformational Flexibility of A Highly Conserved Helix Controls Cryptic Pocket Formation in FtsZ. J.Mol.Biol. (2021)
- Release Date
- 2021-06-09
- Peptides
- Cell division protein FtsZ: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B