SMTL ID : 6y21.1 (1 other biounit)

Crystal structure of delta466-491 cystathionine beta-synthase from Toxoplasma gondii with L-Cystathionine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.60 Å

Oligo State

homo-dimer

Ligands

2 x P1T: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID(Non-covalent)

P1T.1: 19 residues within 4Å: Chain A: K.56, T.83, S.84, N.86, T.87, Q.159, G.191, A.192, G.193, T.194, G.195, T.197, G.243, I.244, Y.246, S.287, P.313, D.314, Y.319 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:I.244, A:D.314 Hydrogen bonds: A:T.83, A:S.84, A:S.84, A:S.84, A:N.86, A:N.86, A:T.87, A:T.87, A:Q.159, A:G.193, A:T.194, A:G.195, A:T.197, A:T.197, A:S.287 Salt bridges: A:K.56 P1T.2: 19 residues within 4Å: Chain B: K.56, T.83, S.84, N.86, T.87, Q.159, G.191, A.192, G.193, T.194, G.195, T.197, G.243, I.244, Y.246, S.287, P.313, D.314, Y.319 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:I.244, B:D.314 Hydrogen bonds: B:S.84, B:S.84, B:S.84, B:N.86, B:N.86, B:T.87, B:T.87, B:Q.159, B:G.193, B:T.194, B:G.195, B:T.197, B:S.287 Salt bridges: B:K.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fernandez-Rodriguez, C. et al., Cystathionine Beta-synthase from Toxoplasma gondii with PLP-Cystathionine. To Be Published

Release Date

2021-02-24

Peptides

Cystathionine beta-synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
D

Cystathionine beta-synthase

Related Entries With Identical Sequence