SMTL ID : 6y2n.1

Crystal structure of ribonucleotide reductase R2 subunit solved by serial synchrotron crystallography

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x MN3: MANGANESE (III) ION(Non-covalent)

MN3.1: 5 residues within 4Å: Chain A: E.82, E.113, H.116, E.220 Ligands: FE.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.82, A:E.113, A:H.116, H2O.1, H2O.1 MN3.3: 5 residues within 4Å: Chain B: E.82, E.113, H.116, E.220 Ligands: FE.4 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.82, B:E.113, B:H.116, H2O.1, H2O.2

2 x FE: FE (III) ION(Non-covalent)

FE.2: 5 residues within 4Å: Chain A: E.113, E.186, E.220, H.223 Ligands: MN3.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.113, A:E.220, A:H.223, H2O.1, H2O.1 FE.4: 5 residues within 4Å: Chain B: E.113, E.186, E.220, H.223 Ligands: MN3.3 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.113, B:E.220, B:H.223, H2O.1, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shilova, A. et al., Current status and future opportunities for serial crystallography at MAX IV Laboratory. J.Synchrotron Radiat. (2020)

Release Date

2020-10-07

Peptides

Ribonucleoside-diphosphate reductase subunit beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Ribonucleoside-diphosphate reductase subunit beta