SMTL ID : 6y43.1

Fibrinogen-like globe domain of human ANGPTL6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.154, D.156, Y.158, G.160, N.161 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.154, A:D.154, A:D.156, H2O.2, H2O.5

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: W.38, R.53, Q.55, D.76, G.77 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.55, A:D.76 Water bridges: A:R.53 EDO.3: 13 residues within 4Å: Chain A: F.61, F.62, T.63, T.64, Y.68, S.149, T.150, V.151, A.163, R.167, G.168, G.169, Y.172 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.151, A:G.168 Water bridges: A:T.150 EDO.4: 6 residues within 4Å: Chain A: A.176, H.177, Q.195, Y.199, A.201, G.206 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.195, A:Q.195 Water bridges: A:H.177, A:G.206, A:G.206

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.5: 9 residues within 4Å: Chain A: Y.158, C.162, Y.165, Q.166, A.174, C.175, R.193, Y.194, Q.195 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.174, A:Q.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coker, J.A. et al., Fibrinogen-like globe domain of human ANGPTL6. To Be Published

Release Date

2020-03-04

Peptides

Angiopoietin-related protein 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Angiopoietin-related protein 6