SMTL ID : 6y9e.6 (5 other biounits)

Crystal structure of putative ancestral haloalkane dehalogenase AncHLD2 (node 2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: N.38, W.104, F.167, F.204, P.205, L.208 Ligand excluded by PLIP CL.2: 5 residues within 4Å: Chain A: H.36, G.37, T.40, Q.102, Q.274 Ligand excluded by PLIP

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: H.139, M.147, S.175 No protein-ligand interaction detected (PLIP) EDO.4: 2 residues within 4Å: Chain A: H.57, L.92 No protein-ligand interaction detected (PLIP) EDO.5: 4 residues within 4Å: Chain A: R.199, L.202, R.203, R.206 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.199, A:R.206 Water bridges: A:R.203 EDO.6: 1 residues within 4Å: Chain A: D.86 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.86 EDO.7: 3 residues within 4Å: Chain A: A.87, D.90, K.91 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.87 Water bridges: A:D.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Babkova, P. et al., Structures of hyperstable ancestral haloalkane dehalogenases show restricted conformational dynamics. Comput Struct Biotechnol J (2020)

Release Date

2020-11-18

Peptides

Ancestral haloalkane dehalogenase AncHLD2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

Ancestral haloalkane dehalogenase AncHLD2

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