SMTL ID : 6ya9.1

Crystal structure of rsGCaMP in the ON state (non-illuminated)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

7 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.395, D.397, D.399, Q.401, E.406 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.395, A:D.397, A:D.399, A:Q.401, A:E.406 CA.2: 5 residues within 4Å: Chain A: D.286, D.288, D.290, T.292, E.297 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.286, A:D.290, A:T.292, A:E.297, H2O.6 CA.3: 6 residues within 4Å: Chain A: D.322, D.324, D.326, T.328, D.330, E.333 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.322, A:D.324, A:D.326, A:D.330, A:E.333 CA.4: 5 residues within 4Å: Chain A: D.359, D.361, N.363, Y.365, E.370 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.359, A:D.361, A:Y.365, A:E.370, H2O.1 CA.5: 3 residues within 4Å: Chain A: D.324, D.326, D.330 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.324, A:D.326, A:D.330, A:D.330 CA.6: 2 residues within 4Å: Chain A: Y.60, T.218 No protein-ligand interaction detected (PLIP) CA.7: 2 residues within 4Å: Chain A: D.346, A.354 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mishra, K. et al., Genetically encoded photo-switchable molecular sensors for optoacoustic and super-resolution imaging. Nat.Biotechnol. (2021)

Release Date

2021-10-06

Peptides

rsCGaMP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

rsCGaMP