SMTL ID : 6yd1.1

SaFtsZ-DFMBA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 17 residues within 4Å: Chain A: G.12, G.13, G.14, N.17, R.21, G.96, M.97, G.99, G.100, T.101, G.102, T.125, P.127, E.131, R.135, N.158, F.175 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:G.13, A:G.14, A:N.17, A:R.21, A:R.21, A:G.100, A:T.101, A:G.102, A:T.125, A:E.131, A:R.135, A:R.135, A:N.158, A:N.158 Water bridges: A:N.36, A:T.37, A:M.97, A:G.99, A:T.101, A:T.101, A:T.103, A:E.131 pi-Stacking: A:F.175 pi-Cation interactions: A:F.175

1 x OLQ: 2,6-difluoro-3-methoxybenzamide(Non-covalent)

OLQ.2: 14 residues within 4Å: Chain A: G.188, D.191, L.192, V.195, G.197, V.199, N.200, L.201, N.255, G.287, T.288, V.289, T.301 Ligands: K.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.192, A:V.195 Hydrogen bonds: A:G.197, A:L.201, A:N.255, A:T.288

1 x K: POTASSIUM ION(Non-covalent)

K.3: 5 residues within 4Å: Chain A: L.192, V.195, N.200, L.201 Ligands: OLQ.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:L.192, A:V.195, A:L.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huecas, S. et al., Targeting the FtsZ Allosteric Binding Site with a Novel Fluorescence Polarization Screen, Cytological and Structural Approaches for Antibacterial Discovery. J.Med.Chem. (2021)

Release Date

2021-07-28

Peptides

Cell division protein FtsZ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division protein FtsZ

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