SMTL ID : 6ydc.2 (3 other biounits)

X-ray structure of LPMO

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose

BGC-BGC-BGC-BGC.1: 11 residues within 4Å: Chain A: H.1, R.67, D.76, S.78, H.79, H.152, E.153, D.155, R.164, Y.208 Ligands: CU.2 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.155, A:D.155, A:D.155 Hydrogen bonds: A:Y.169, A:Y.169

1 x CU: COPPER (II) ION(Non-covalent)

CU.2: 5 residues within 4Å: Chain A: H.1, H.79, Q.167, Y.169 Ligands: BGC-BGC-BGC-BGC.1 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.79, A:Y.169, H2O.8

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: K.197, Y.198, S.199 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.198, A:S.199, A:S.199 Water bridges: A:D.159, A:D.159, A:S.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tandrup, T. et al., Oligosaccharide Binding and Thermostability of Two Related AA9 Lytic Polysaccharide Monooxygenases. Biochemistry (2020)

Release Date

2020-09-16

Peptides

LPMO lytic polysaccharide monooxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

LPMO lytic polysaccharide monooxygenase

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