- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- hetero-1-1-1-1-mer
- Ligands
- 1 x COA: COENZYME A(Non-covalent)
- 6 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 1 residues within 4Å:- Chain A: Y.5
Ligand excluded by PLIPCL.11: 3 residues within 4Å:- Chain B: N.385, S.432, Y.435
Ligand excluded by PLIPCL.12: 2 residues within 4Å:- Chain B: E.370, Q.530
Ligand excluded by PLIPCL.13: 3 residues within 4Å:- Chain B: W.398, F.413, S.446
Ligand excluded by PLIPCL.14: 2 residues within 4Å:- Chain B: H.367, W.438
Ligand excluded by PLIPCL.15: 1 residues within 4Å:- Chain B: I.584
Ligand excluded by PLIP- 10 x IOD: IODIDE ION(Non-functional Binders)
IOD.3: 4 residues within 4Å:- Chain A: K.139, R.140
- Chain B: R.410, Q.411
Ligand excluded by PLIPIOD.4: 3 residues within 4Å:- Chain B: K.461, P.462, F.463
Ligand excluded by PLIPIOD.5: 2 residues within 4Å:- Chain B: Y.276, R.281
Ligand excluded by PLIPIOD.6: 2 residues within 4Å:- Chain B: T.109, P.111
Ligand excluded by PLIPIOD.7: 2 residues within 4Å:- Chain B: S.422, Q.426
Ligand excluded by PLIPIOD.8: 1 residues within 4Å:- Chain B: T.159
Ligand excluded by PLIPIOD.9: 3 residues within 4Å:- Chain B: E.627, T.630, V.693
Ligand excluded by PLIPIOD.10: 1 residues within 4Å:- Chain B: Q.433
Ligand excluded by PLIPIOD.21: 2 residues within 4Å:- Chain B: Q.284
- Chain C: G.54
Ligand excluded by PLIPIOD.22: 3 residues within 4Å:- Chain C: K.5, L.6, S.7
Ligand excluded by PLIP- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.16: 5 residues within 4Å:- Chain B: E.544, T.548, Y.674, L.678, F.722
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:E.544
EDO.17: 4 residues within 4Å:- Chain B: Q.649, G.650, N.657, V.659
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.657
- Water bridges: B:L.660
EDO.18: 1 residues within 4Å:- Chain B: S.594
No protein-ligand interaction detected (PLIP)EDO.19: 7 residues within 4Å:- Chain B: R.95, P.268, P.269, K.270, G.271, A.272, F.273
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:G.271, B:A.272, B:F.273, B:F.273
EDO.20: 6 residues within 4Å:- Chain B: N.546, I.547, S.550, E.636, N.639, S.643
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:S.550, B:S.643, B:S.643
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Grunwald, S. et al., Divergent architecture of the heterotrimeric NatC complex explains N-terminal acetylation of cognate substrates. Nat Commun (2020)
- Release Date
- 2020-10-28
- Peptides
- N-alpha-acetyltransferase 30: A
N-alpha-acetyltransferase 35, NatC auxiliary subunit: B
N-alpha-acetyltransferase 38, NatC auxiliary subunit: C
Major capsid protein: D - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- hetero-1-1-1-1-mer
- Ligands
- 1 x COA: COENZYME A(Non-covalent)
- 6 x CL: CHLORIDE ION(Non-functional Binders)
- 10 x IOD: IODIDE ION(Non-functional Binders)
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Grunwald, S. et al., Divergent architecture of the heterotrimeric NatC complex explains N-terminal acetylation of cognate substrates. Nat Commun (2020)
- Release Date
- 2020-10-28
- Peptides
- N-alpha-acetyltransferase 30: A
N-alpha-acetyltransferase 35, NatC auxiliary subunit: B
N-alpha-acetyltransferase 38, NatC auxiliary subunit: C
Major capsid protein: D - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D