SMTL ID : 6yh7.1

Crystal structure of chimeric carbonic anhydrase XII with 3-[(1S)-2,3-Dihydro-1H-inden-1-ylamino]-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.12 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.94, H.96, E.106, H.119, T.198 Ligands: 5EF.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.94, A:H.96, A:H.119

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 4 residues within 4Å: Chain A: Y.7, D.242, W.244, P.246 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:D.242 pi-Cation interactions: A:W.244, A:W.244

2 x 5EF: 3-[(1S)-2,3-dihydro-1H-inden-1-ylamino]-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide(Non-covalent)

5EF.3: 16 residues within 4Å: Chain A: N.62, K.67, Q.92, H.94, H.96, E.106, H.119, V.121, A.130, S.134, L.140, L.197, T.198, T.199, P.200 Ligands: ZN.1 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.121, A:L.140, A:L.197 Hydrogen bonds: A:Q.92, A:E.106, A:T.198, A:T.199, A:P.200 Water bridges: A:K.67, A:K.67, A:K.67, A:K.67 5EF.4: 7 residues within 4Å: Chain A: P.154, G.155, K.158, F.178, D.179, R.181, G.182 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:R.181 Hydrogen bonds: A:D.179, A:D.179 Water bridges: A:K.158 Halogen bonds: A:D.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smirnoviene, J. et al., Switching the Inhibitor-Enzyme Recognition Profile via Chimeric Carbonic Anhydrase XII. Chemistryopen (2021)

Release Date

2021-04-07

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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