SMTL ID : 6yli.1 (1 other biounit)

Crystal structure of human bcl-xL bound to trichoplax adhaerens trBak BH3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-1-1-mer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.15, V.19, W.33, A.136, A.137, A.140 No protein-ligand interaction detected (PLIP) SO4.2: 2 residues within 4Å: Chain A: R.134, A.137 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.134 SO4.3: 4 residues within 4Å: Chain A: S.23, S.32, W.33, S.34 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.23, A:W.33, A:S.34 SO4.4: 5 residues within 4Å: Chain A: R.15, A.140, T.141, N.144, D.145 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.141, A:N.144, A:D.145 Water bridges: A:T.141, A:T.141 Salt bridges: A:R.15 SO4.5: 5 residues within 4Å: Chain A: D.102, G.103, V.104, N.105, R.108 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.105 Salt bridges: A:R.108 SO4.6: 4 residues within 4Å: Chain A: R.69, Y.70 Chain B: S.18, R.22 7 PLIP interactions: 5 interactions with chain B, 2 interactions with chain A Water bridges: B:S.18, B:R.22, B:R.22, B:R.22 Salt bridges: B:R.22, A:R.69 Hydrogen bonds: A:Y.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Popgeorgiev, N. et al., Ancient and conserved functional interplay between Bcl-2 family proteins in the mitochondrial pathway of apoptosis. Sci Adv (2020)

Release Date

2021-03-17

Peptides

Bcl-2-like protein 1: A
Bcl-2 homologous antagonist/killer: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bcl-2-like protein 1

Bcl-2 homologous antagonist/killer

Related Entries With Identical Sequence