- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 48 x CHL: CHLOROPHYLL B(Non-covalent)(Covalent)
- 150 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
CLA.2: 22 residues within 4Å:- Chain A: L.24, P.29, G.30, D.31, Y.32, G.33, W.34, D.35, L.39, S.40, F.46, N.49, R.50, L.52, E.53, H.56, R.173, M.176
- Ligands: CHL.1, CLA.3, LUT.16, CLA.39
17 PLIP interactions:17 interactions with chain A,- Hydrophobic interactions: A:W.34, A:W.34, A:L.39, A:F.46, A:N.49, A:R.50, A:L.52, A:E.53, A:E.53, A:R.173, A:R.173, A:M.176
- Hydrogen bonds: A:Y.32, A:W.34
- Salt bridges: A:R.173
- pi-Stacking: A:W.34
- pi-Cation interactions: A:R.173
CLA.3: 9 residues within 4Å:- Chain A: L.52, H.56
- Ligands: CLA.2, CHL.9, LUT.16, CHL.20, CLA.21, CLA.22, CLA.39
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:L.52
- pi-Stacking: A:H.56, A:H.56
- pi-Cation interactions: A:H.56
CLA.4: 14 residues within 4Å:- Chain A: L.62, G.63, G.66, F.69, P.70, F.80, Q.91, L.98, Y.100, L.101
- Ligands: CHL.6, LUT.15, LUT.16, NEX.18
7 PLIP interactions:7 interactions with chain A,- Hydrophobic interactions: A:F.80, A:L.98, A:Y.100, A:L.101
- Hydrogen bonds: A:Q.91, A:L.101
- pi-Stacking: A:Y.100
CLA.10: 15 residues within 4Å:- Chain A: R.58, M.61, L.62, Y.144, P.145, G.146, F.149, D.150, L.154, F.161, L.164, E.168
- Ligands: CHL.8, CLA.12, LUT.15
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:R.58, A:R.58, A:M.61, A:L.62, A:L.62, A:D.150, A:L.164, A:E.168
- Hydrogen bonds: A:G.146
- pi-Cation interactions: A:R.58, A:R.58
CLA.11: 7 residues within 4Å:- Chain A: W.4, K.167, K.170, N.171
- Ligands: CLA.12, XAT.17, LHG.19
6 PLIP interactions:6 interactions with chain A,- Hydrophobic interactions: A:W.4, A:K.170, A:K.170
- Salt bridges: A:K.170
- pi-Cation interactions: A:K.170, A:K.170
CLA.12: 7 residues within 4Å:- Chain A: M.61, L.164, K.167, N.171, L.174
- Ligands: CLA.10, CLA.11
4 PLIP interactions:4 interactions with chain A,- Hydrophobic interactions: A:K.167, A:L.174
- Salt bridges: A:K.167, A:K.167
CLA.13: 17 residues within 4Å:- Chain A: S.178, M.179, F.180, G.181, F.182, F.183, V.184, Q.185, P.193, N.196, L.197, N.207, N.208, A.209, Y.212
- Ligands: CLA.14, LHG.19
14 PLIP interactions:14 interactions with chain A,- Hydrophobic interactions: A:F.180, A:F.182, A:F.182, A:F.183, A:V.184, A:V.184, A:Q.185, A:N.196, A:L.197, A:N.208
- Hydrogen bonds: A:Q.185, A:A.209
- Salt bridges: A:H.200
- Metal complexes: A:G.181
CLA.14: 6 residues within 4Å:- Chain A: H.200, L.201, P.204, V.205, W.210
- Ligands: CLA.13
5 PLIP interactions:5 interactions with chain A,- Hydrophobic interactions: A:P.204, A:P.204
- pi-Stacking: A:H.200, A:H.200
- Metal complexes: A:H.200
CLA.21: 21 residues within 4Å:- Chain B: L.24, P.29, G.30, D.31, Y.32, G.33, W.34, D.35, L.39, S.40, F.46, N.49, R.50, L.52, E.53, H.56, R.173, M.176
- Ligands: CLA.3, CHL.20, CLA.22
17 PLIP interactions:17 interactions with chain B,- Hydrophobic interactions: B:W.34, B:W.34, B:L.39, B:F.46, B:N.49, B:R.50, B:L.52, B:E.53, B:E.53, B:R.173, B:R.173, B:M.176
- Hydrogen bonds: B:Y.32, B:W.34
- Salt bridges: B:R.173
- pi-Stacking: B:W.34
- pi-Cation interactions: B:R.173
CLA.22: 8 residues within 4Å:- Chain B: L.52, H.56
- Ligands: CLA.3, CLA.21, CHL.27, CHL.37, CLA.38, CLA.39
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:L.52
- pi-Stacking: B:H.56, B:H.56
- pi-Cation interactions: B:H.56
CLA.23: 13 residues within 4Å:- Chain B: L.62, G.63, G.66, F.69, P.70, F.80, Q.91, L.98, Y.100, L.101
- Ligands: CHL.24, LUT.33, NEX.35
7 PLIP interactions:7 interactions with chain B,- Hydrophobic interactions: B:F.80, B:L.98, B:Y.100, B:L.101
- Hydrogen bonds: B:Q.91, B:L.101
- pi-Stacking: B:Y.100
CLA.28: 15 residues within 4Å:- Chain B: R.58, M.61, L.62, Y.144, P.145, G.146, F.149, D.150, L.154, F.161, L.164, E.168
- Ligands: CHL.26, CLA.30, LUT.33
11 PLIP interactions:11 interactions with chain B,- Hydrophobic interactions: B:R.58, B:R.58, B:M.61, B:L.62, B:L.62, B:D.150, B:L.164, B:E.168
- Hydrogen bonds: B:G.146
- pi-Cation interactions: B:R.58, B:R.58
CLA.29: 7 residues within 4Å:- Chain B: W.4, K.167, K.170, N.171
- Ligands: CLA.30, XAT.34, LHG.36
6 PLIP interactions:6 interactions with chain B,- Hydrophobic interactions: B:W.4, B:K.170, B:K.170
- Salt bridges: B:K.170
- pi-Cation interactions: B:K.170, B:K.170
CLA.30: 7 residues within 4Å:- Chain B: M.61, L.164, K.167, N.171, L.174
- Ligands: CLA.28, CLA.29
4 PLIP interactions:4 interactions with chain B,- Hydrophobic interactions: B:K.167, B:L.174
- Salt bridges: B:K.167, B:K.167
CLA.31: 17 residues within 4Å:- Chain B: S.178, M.179, F.180, G.181, F.182, F.183, V.184, Q.185, P.193, N.196, L.197, N.207, N.208, A.209, Y.212
- Ligands: CLA.32, LHG.36
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:F.180, B:F.182, B:F.182, B:F.183, B:V.184, B:V.184, B:Q.185, B:N.196, B:L.197, B:N.208
- Hydrogen bonds: B:Q.185, B:A.209
- Salt bridges: B:H.200
- Metal complexes: B:G.181
CLA.32: 6 residues within 4Å:- Chain B: H.200, L.201, P.204, V.205, W.210
- Ligands: CLA.31
5 PLIP interactions:5 interactions with chain B,- Hydrophobic interactions: B:P.204, B:P.204
- pi-Stacking: B:H.200, B:H.200
- Metal complexes: B:H.200
CLA.38: 22 residues within 4Å:- Chain C: L.24, P.29, G.30, D.31, Y.32, G.33, W.34, D.35, L.39, S.40, F.46, N.49, R.50, L.52, E.53, H.56, R.173, M.176
- Ligands: CLA.22, CHL.27, CHL.37, CLA.39
17 PLIP interactions:17 interactions with chain C,- Hydrophobic interactions: C:W.34, C:W.34, C:L.39, C:F.46, C:N.49, C:R.50, C:L.52, C:E.53, C:E.53, C:R.173, C:R.173, C:M.176
- Hydrogen bonds: C:Y.32, C:W.34
- Salt bridges: C:R.173
- pi-Stacking: C:W.34
- pi-Cation interactions: C:R.173
CLA.39: 8 residues within 4Å:- Chain C: L.52, H.56
- Ligands: CHL.1, CLA.2, CLA.3, CLA.22, CLA.38, CHL.45
4 PLIP interactions:4 interactions with chain C,- Hydrophobic interactions: C:L.52
- pi-Stacking: C:H.56, C:H.56
- pi-Cation interactions: C:H.56
CLA.40: 13 residues within 4Å:- Chain C: L.62, G.63, G.66, F.69, P.70, F.80, Q.91, L.98, Y.100, L.101
- Ligands: CHL.42, LUT.50, NEX.52
7 PLIP interactions:7 interactions with chain C,- Hydrophobic interactions: C:F.80, C:L.98, C:Y.100, C:L.101
- Hydrogen bonds: C:Q.91, C:L.101
- pi-Stacking: C:Y.100
CLA.46: 15 residues within 4Å:- Chain C: R.58, M.61, L.62, Y.144, P.145, G.146, F.149, D.150, L.154, F.161, L.164, E.168
- Ligands: CHL.44, LUT.50, CLA.183
11 PLIP interactions:11 interactions with chain C,- Hydrophobic interactions: C:R.58, C:R.58, C:M.61, C:L.62, C:L.62, C:D.150, C:L.164, C:E.168
- Hydrogen bonds: C:G.146
- pi-Cation interactions: C:R.58, C:R.58
CLA.47: 8 residues within 4Å:- Chain C: W.4, K.167, K.170, N.171
- Ligands: LHG.53, LHG.161, LHG.162, CLA.183
6 PLIP interactions:6 interactions with chain C,- Hydrophobic interactions: C:W.4, C:K.170, C:K.170
- Salt bridges: C:K.170
- pi-Cation interactions: C:K.170, C:K.170
CLA.48: 18 residues within 4Å:- Chain C: S.178, M.179, F.180, G.181, F.182, F.183, V.184, Q.185, P.193, N.196, L.197, N.207, N.208, A.209, Y.212
- Ligands: CLA.49, XAT.51, LHG.53
14 PLIP interactions:14 interactions with chain C,- Hydrophobic interactions: C:F.180, C:F.182, C:F.182, C:F.183, C:V.184, C:V.184, C:Q.185, C:N.196, C:L.197, C:N.208
- Hydrogen bonds: C:Q.185, C:A.209
- Salt bridges: C:H.200
- Metal complexes: C:G.181
CLA.49: 7 residues within 4Å:- Chain C: H.200, L.201, P.204, V.205, W.210
- Ligands: CLA.48, LHG.53
5 PLIP interactions:5 interactions with chain C,- Hydrophobic interactions: C:P.204, C:P.204
- pi-Stacking: C:H.200, C:H.200
- Metal complexes: C:H.200
CLA.56: 22 residues within 4Å:- Chain D: L.24, P.29, G.30, D.31, Y.32, G.33, W.34, D.35, L.39, S.40, F.46, N.49, R.50, L.52, E.53, H.56, R.173, M.176
- Ligands: CHL.55, CLA.57, LUT.70, CLA.93
17 PLIP interactions:17 interactions with chain D,- Hydrophobic interactions: D:W.34, D:W.34, D:L.39, D:F.46, D:N.49, D:R.50, D:L.52, D:E.53, D:E.53, D:R.173, D:R.173, D:M.176
- Hydrogen bonds: D:Y.32, D:W.34
- Salt bridges: D:R.173
- pi-Stacking: D:W.34
- pi-Cation interactions: D:R.173
CLA.57: 10 residues within 4Å:- Chain D: L.52, H.56
- Ligands: CLA.56, CHL.63, LUT.70, CHL.73, CLA.74, CLA.75, CHL.91, CLA.93
4 PLIP interactions:4 interactions with chain D,- Hydrophobic interactions: D:L.52
- pi-Stacking: D:H.56, D:H.56
- pi-Cation interactions: D:H.56
CLA.58: 13 residues within 4Å:- Chain D: L.62, G.63, G.66, F.69, P.70, F.80, Q.91, L.98, Y.100, L.101
- Ligands: CHL.60, LUT.69, LUT.70
7 PLIP interactions:7 interactions with chain D,- Hydrophobic interactions: D:F.80, D:L.98, D:Y.100, D:L.101
- Hydrogen bonds: D:Q.91, D:L.101
- pi-Stacking: D:Y.100
CLA.64: 15 residues within 4Å:- Chain D: R.58, M.61, L.62, Y.144, P.145, G.146, F.149, D.150, L.154, F.161, L.164, E.168
- Ligands: CHL.62, CLA.66, LUT.69
12 PLIP interactions:12 interactions with chain D,- Hydrophobic interactions: D:R.58, D:R.58, D:M.61, D:L.62, D:L.62, D:D.150, D:L.164, D:L.164, D:E.168
- Hydrogen bonds: D:G.146
- pi-Cation interactions: D:R.58, D:R.58
CLA.65: 6 residues within 4Å:- Chain D: W.4, K.167, K.170, N.171
- Ligands: CLA.66, LHG.72
6 PLIP interactions:6 interactions with chain D,- Hydrophobic interactions: D:W.4, D:K.170, D:K.170
- Salt bridges: D:K.170
- pi-Cation interactions: D:K.170, D:K.170
CLA.66: 7 residues within 4Å:- Chain D: M.61, L.164, K.167, N.171, L.174
- Ligands: CLA.64, CLA.65
4 PLIP interactions:4 interactions with chain D,- Hydrophobic interactions: D:K.167, D:L.174
- Salt bridges: D:K.167, D:K.167
CLA.67: 18 residues within 4Å:- Chain D: S.178, M.179, F.180, G.181, F.182, F.183, V.184, Q.185, P.193, N.196, L.197, N.207, N.208, A.209, Y.212
- Chain F: W.116
- Ligands: CLA.68, LHG.72
15 PLIP interactions:14 interactions with chain D, 1 interactions with chain F,- Hydrophobic interactions: D:F.180, D:F.182, D:F.182, D:F.183, D:V.184, D:V.184, D:Q.185, D:N.196, D:L.197, D:N.208, F:W.116
- Hydrogen bonds: D:Q.185, D:A.209
- Salt bridges: D:H.200
- Metal complexes: D:G.181
CLA.68: 7 residues within 4Å:- Chain D: H.200, L.201, P.204, V.205, W.210
- Chain F: L.113
- Ligands: CLA.67
5 PLIP interactions:5 interactions with chain D,- Hydrophobic interactions: D:P.204, D:P.204
- pi-Stacking: D:H.200, D:H.200
- Metal complexes: D:H.200
CLA.74: 22 residues within 4Å:- Chain E: L.24, P.29, G.30, D.31, Y.32, G.33, W.34, D.35, L.39, S.40, F.46, N.49, R.50, L.52, E.53, H.56, R.173, M.176
- Ligands: CLA.57, CHL.73, CLA.75, LUT.87
17 PLIP interactions:17 interactions with chain E,- Hydrophobic interactions: E:W.34, E:W.34, E:L.39, E:F.46, E:N.49, E:R.50, E:L.52, E:E.53, E:E.53, E:R.173, E:R.173, E:M.176
- Hydrogen bonds: E:Y.32, E:W.34
- Salt bridges: E:R.173
- pi-Stacking: E:W.34
- pi-Cation interactions: E:R.173
CLA.75: 9 residues within 4Å:- Chain E: L.52, H.56
- Ligands: CLA.57, CLA.74, CHL.80, LUT.87, CHL.91, CLA.92, CLA.93
4 PLIP interactions:4 interactions with chain E,- Hydrophobic interactions: E:L.52
- pi-Stacking: E:H.56, E:H.56
- pi-Cation interactions: E:H.56
CLA.76: 14 residues within 4Å:- Chain E: L.62, G.63, G.66, F.69, P.70, F.80, Q.91, L.98, Y.100, L.101
- Ligands: CHL.77, LUT.86, LUT.87, NEX.89
7 PLIP interactions:7 interactions with chain E,- Hydrophobic interactions: E:F.80, E:L.98, E:Y.100, E:L.101
- Hydrogen bonds: E:Q.91, E:L.101
- pi-Stacking: E:Y.100
CLA.81: 15 residues within 4Å:- Chain E: R.58, M.61, L.62, Y.144, P.145, G.146, F.149, D.150, L.154, F.161, L.164, E.168
- Ligands: CHL.79, CLA.83, LUT.86
11 PLIP interactions:11 interactions with chain E,- Hydrophobic interactions: E:R.58, E:R.58, E:M.61, E:L.62, E:L.62, E:D.150, E:L.164, E:E.168
- Hydrogen bonds: E:G.146
- pi-Cation interactions: E:R.58, E:R.58
CLA.82: 6 residues within 4Å:- Chain E: W.4, K.167, K.170, N.171
- Ligands: CLA.83, LHG.90
6 PLIP interactions:6 interactions with chain E,- Hydrophobic interactions: E:W.4, E:K.170, E:K.170
- Salt bridges: E:K.170
- pi-Cation interactions: E:K.170, E:K.170
CLA.83: 7 residues within 4Å:- Chain E: M.61, L.164, K.167, N.171, L.174
- Ligands: CLA.81, CLA.82
4 PLIP interactions:4 interactions with chain E,- Hydrophobic interactions: E:K.167, E:L.174
- Salt bridges: E:K.167, E:K.167
CLA.84: 17 residues within 4Å:- Chain E: S.178, M.179, F.180, G.181, F.182, F.183, V.184, Q.185, P.193, N.196, L.197, N.207, N.208, A.209, Y.212
- Ligands: CLA.85, LHG.90
14 PLIP interactions:14 interactions with chain E,- Hydrophobic interactions: E:F.180, E:F.182, E:F.182, E:F.183, E:V.184, E:V.184, E:Q.185, E:N.196, E:L.197, E:N.208
- Hydrogen bonds: E:Q.185, E:A.209
- Salt bridges: E:H.200
- Metal complexes: E:G.181
CLA.85: 6 residues within 4Å:- Chain E: H.200, L.201, P.204, V.205, W.210
- Ligands: CLA.84
5 PLIP interactions:5 interactions with chain E,- Hydrophobic interactions: E:P.204, E:P.204
- pi-Stacking: E:H.200
- pi-Cation interactions: E:H.200
- Metal complexes: E:H.200
CLA.92: 23 residues within 4Å:- Chain F: L.24, P.29, G.30, D.31, Y.32, G.33, W.34, D.35, L.39, S.40, F.46, N.49, R.50, L.52, E.53, H.56, R.173, M.176
- Ligands: CLA.75, CHL.80, CHL.91, CLA.93, LUT.104
17 PLIP interactions:17 interactions with chain F,- Hydrophobic interactions: F:W.34, F:W.34, F:L.39, F:F.46, F:N.49, F:R.50, F:L.52, F:E.53, F:E.53, F:R.173, F:R.173, F:M.176
- Hydrogen bonds: F:Y.32, F:W.34
- Salt bridges: F:R.173
- pi-Stacking: F:W.34
- pi-Cation interactions: F:R.173
CLA.93: 9 residues within 4Å:- Chain F: L.52, H.56
- Ligands: CHL.55, CLA.56, CLA.57, CLA.75, CLA.92, CHL.98, LUT.104
4 PLIP interactions:4 interactions with chain F,- Hydrophobic interactions: F:L.52
- pi-Stacking: F:H.56, F:H.56
- pi-Cation interactions: F:H.56
CLA.94: 14 residues within 4Å:- Chain F: L.62, G.63, G.66, F.69, P.70, F.80, Q.91, L.98, Y.100, L.101
- Ligands: CHL.95, LUT.103, LUT.104, NEX.106
7 PLIP interactions:7 interactions with chain F,- Hydrophobic interactions: F:F.80, F:L.98, F:Y.100, F:L.101
- Hydrogen bonds: F:Q.91, F:L.101
- pi-Stacking: F:Y.100
CLA.99: 15 residues within 4Å:- Chain F: R.58, M.61, L.62, Y.144, P.145, G.146, F.149, D.150, L.154, F.161, L.164, E.168
- Ligands: CHL.97, LUT.103, CLA.269
11 PLIP interactions:11 interactions with chain F,- Hydrophobic interactions: F:R.58, F:R.58, F:M.61, F:L.62, F:L.62, F:D.150, F:L.164, F:E.168
- Hydrogen bonds: F:G.146
- pi-Cation interactions: F:R.58, F:R.58
CLA.100: 9 residues within 4Å:- Chain F: W.4, K.167, K.170, N.171
- Ligands: XAT.105, LHG.107, LHG.241, LHG.242, CLA.269
6 PLIP interactions:6 interactions with chain F,- Hydrophobic interactions: F:W.4, F:K.170, F:K.170
- Salt bridges: F:K.170
- pi-Cation interactions: F:K.170, F:K.170
CLA.101: 18 residues within 4Å:- Chain F: S.178, M.179, F.180, G.181, F.182, F.183, V.184, Q.185, P.193, N.196, L.197, N.207, N.208, A.209, Y.212
- Ligands: CLA.102, XAT.105, LHG.107
14 PLIP interactions:14 interactions with chain F,- Hydrophobic interactions: F:F.180, F:F.182, F:F.182, F:F.183, F:V.184, F:V.184, F:Q.185, F:N.196, F:L.197, F:N.208
- Hydrogen bonds: F:Q.185, F:A.209
- Salt bridges: F:H.200
- Metal complexes: F:G.181
CLA.102: 6 residues within 4Å:- Chain F: H.200, L.201, P.204, V.205, W.210
- Ligands: CLA.101
5 PLIP interactions:5 interactions with chain F,- Hydrophobic interactions: F:P.204, F:P.204
- pi-Stacking: F:H.200, F:H.200
- Metal complexes: F:H.200
CLA.111: 18 residues within 4Å:- Chain G: P.140, A.143, V.147, M.173, I.174, F.176, Q.177, I.182, L.183, H.188, I.273, T.276, A.277, I.280
- Ligands: CLA.112, CLA.113, PHO.114, CLA.166
6 PLIP interactions:6 interactions with chain G,- Hydrophobic interactions: G:P.140, G:M.173, G:F.176, G:Q.177, G:I.182, G:L.183
CLA.112: 12 residues within 4Å:- Chain G: I.166, T.169, F.170, M.173
- Chain J: M.187, V.190, G.195
- Ligands: CLA.111, PHO.114, CLA.166, PL9.169, LHG.171
1 PLIP interactions:1 interactions with chain G,- Hydrophobic interactions: G:F.170
CLA.113: 11 residues within 4Å:- Chain G: M.189, V.192, A.193
- Chain J: V.164, I.167, F.168, I.171
- Ligands: CLA.111, PHO.164, CLA.166, LMG.173
3 PLIP interactions:1 interactions with chain G, 2 interactions with chain J,- Hydrophobic interactions: G:V.192, J:I.167, J:I.171
CLA.115: 17 residues within 4Å:- Chain G: L.26, P.29, T.30, T.33, F.83, Y.84, P.85, I.86, W.87, L.104, H.108
- Chain N: Y.9, V.12, V.16
- Chain U: F.15
- Ligands: BCR.116, LMG.184
12 PLIP interactions:9 interactions with chain G, 1 interactions with chain U, 2 interactions with chain N,- Hydrophobic interactions: G:P.29, G:T.30, G:F.83, G:W.87, G:L.104, U:F.15, N:Y.9, N:V.16
- Hydrogen bonds: G:I.86
- pi-Stacking: G:H.108, G:H.108
- Metal complexes: G:H.108
CLA.121: 17 residues within 4Å:- Chain H: G.188, F.189, P.191, G.196, S.199, H.200, A.203, L.207, F.246, F.249
- Chain M: F.41, I.45, L.46, Y.49
- Ligands: CLA.122, DGD.176, CLA.185
13 PLIP interactions:3 interactions with chain M, 10 interactions with chain H,- Hydrophobic interactions: M:F.41, M:L.46, M:Y.49, H:F.189, H:F.189, H:H.200, H:L.207, H:F.246, H:F.246, H:F.246, H:F.249
- pi-Cation interactions: H:H.200
- Metal complexes: H:H.200
CLA.122: 17 residues within 4Å:- Chain H: R.67, L.68, C.149, F.152, H.200, H.201, F.246, A.247, V.251, T.261
- Ligands: CLA.121, CLA.123, CLA.124, CLA.125, CLA.127, CLA.128, CLA.129
8 PLIP interactions:8 interactions with chain H,- Hydrophobic interactions: H:F.152, H:F.152, H:A.247
- Hydrogen bonds: H:R.67
- Salt bridges: H:R.67
- pi-Stacking: H:H.200, H:H.201
- Metal complexes: H:H.201
CLA.123: 20 residues within 4Å:- Chain H: W.32, F.60, F.64, R.67, V.244, A.248, V.251, F.450, H.454, F.457, A.458, F.461
- Ligands: CLA.122, CLA.124, CLA.125, CLA.126, CLA.129, CLA.131, CLA.132, CLA.134
13 PLIP interactions:13 interactions with chain H,- Hydrophobic interactions: H:W.32, H:F.60, H:F.64, H:F.64, H:V.244, H:A.248, H:V.251, H:F.457, H:F.457, H:F.461, H:F.461
- Salt bridges: H:R.67
- pi-Stacking: H:H.454
CLA.124: 18 residues within 4Å:- Chain H: T.26, V.29, A.33, V.61, F.64, M.65, R.67, L.68, V.95, H.99, F.102, L.142
- Ligands: CLA.122, CLA.123, CLA.125, CLA.128, CLA.129, CLA.134
8 PLIP interactions:8 interactions with chain H,- Hydrophobic interactions: H:T.26, H:V.29, H:A.33, H:V.95, H:F.102, H:L.142
- Salt bridges: H:R.67
- pi-Cation interactions: H:H.99
CLA.125: 19 residues within 4Å:- Chain H: L.68, I.70, W.90, A.98, H.99, F.102, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: CLA.122, CLA.123, CLA.124, CLA.135, BCR.138, LHG.139
10 PLIP interactions:10 interactions with chain H,- Hydrophobic interactions: H:L.68, H:I.70, H:W.90, H:F.102, H:F.152, H:F.155, H:H.156, H:F.161, H:F.161
- pi-Stacking: H:H.156
CLA.126: 14 residues within 4Å:- Chain H: W.32, M.36, Q.57, G.58, F.60, L.323, G.327, P.446, W.449, F.450
- Ligands: CLA.123, CLA.132, LMG.267, BCR.268
7 PLIP interactions:7 interactions with chain H,- Hydrophobic interactions: H:W.32, H:F.60, H:P.446, H:W.449, H:W.449
- Hydrogen bonds: H:G.327
- pi-Stacking: H:F.60
CLA.127: 14 residues within 4Å:- Chain H: S.238, A.242, H.465, I.466, G.469, L.473
- Chain J: F.109, I.112, M.115, L.116
- Ligands: CLA.122, CLA.128, CLA.129, CLA.167
8 PLIP interactions:5 interactions with chain H, 3 interactions with chain J,- Hydrophobic interactions: H:A.242, H:I.466, J:F.109, J:I.112, J:L.116
- Hydrogen bonds: H:S.238
- pi-Stacking: H:H.465
- Metal complexes: H:H.465
CLA.128: 13 residues within 4Å:- Chain H: F.138, A.211, F.214, H.215, P.220, P.221
- Chain M: T.27, M.31
- Ligands: CLA.122, CLA.124, CLA.127, CLA.129, BCR.175
9 PLIP interactions:7 interactions with chain H, 2 interactions with chain M,- Hydrophobic interactions: H:F.138, H:F.138, H:A.211, H:F.214, H:F.214, M:M.31
- Salt bridges: H:H.215
- Metal complexes: H:H.215
- Hydrogen bonds: M:T.27
CLA.129: 14 residues within 4Å:- Chain H: L.134, F.138, H.141, L.142, M.230, V.236, S.239
- Ligands: CLA.122, CLA.123, CLA.124, CLA.127, CLA.128, CLA.131, CLA.134
5 PLIP interactions:5 interactions with chain H,- Hydrophobic interactions: H:L.134, H:F.138, H:M.230, H:V.236
- Hydrogen bonds: H:H.141
CLA.130: 16 residues within 4Å:- Chain H: W.4, Y.5, R.6, V.7, H.8, T.9, F.461, F.463, G.464, W.467, H.468, R.471
- Ligands: CLA.131, CLA.132, CLA.133, LHG.170
13 PLIP interactions:13 interactions with chain H,- Hydrophobic interactions: H:W.4, H:H.8, H:T.9, H:F.461, H:F.463, H:W.467
- Hydrogen bonds: H:H.8, H:T.9
- Salt bridges: H:H.8, H:R.471
- pi-Stacking: H:W.467, H:H.468
- Metal complexes: H:H.468
CLA.131: 15 residues within 4Å:- Chain H: H.8, V.11, L.18, H.22, H.25, T.26, I.233, L.237, S.240
- Ligands: CLA.123, CLA.129, CLA.130, CLA.132, CLA.133, CLA.134
10 PLIP interactions:10 interactions with chain H,- Hydrophobic interactions: H:V.11, H:H.25, H:T.26, H:I.233, H:L.237, H:L.237
- Hydrogen bonds: H:S.240
- Salt bridges: H:H.22
- pi-Stacking: H:H.22, H:H.25
CLA.132: 11 residues within 4Å:- Chain H: H.8, H.25, V.29, F.461
- Ligands: CLA.123, CLA.126, CLA.130, CLA.131, CLA.133, LHG.170, LHG.181
5 PLIP interactions:5 interactions with chain H,- Hydrophobic interactions: H:V.29, H:F.461
- Salt bridges: H:H.8
- pi-Stacking: H:H.25, H:H.25
CLA.133: 11 residues within 4Å:- Chain H: V.7, H.8, V.10, V.21
- Chain R: F.21
- Ligands: CLA.130, CLA.131, CLA.132, BCR.136, SQD.180, SQD.263
6 PLIP interactions:5 interactions with chain H, 1 interactions with chain R,- Hydrophobic interactions: H:V.7, H:V.21, R:F.21
- pi-Stacking: H:H.8, H:H.8
- Metal complexes: H:H.8
CLA.134: 11 residues within 4Å:- Chain H: L.19, H.22, I.23, I.137, H.141, L.144
- Ligands: CLA.123, CLA.124, CLA.129, CLA.131, CLA.135
4 PLIP interactions:4 interactions with chain H,- Hydrophobic interactions: H:I.137, H:L.144
- Hydrogen bonds: H:H.22
- pi-Stacking: H:H.141
CLA.135: 10 residues within 4Å:- Chain H: L.19, I.23, A.109, W.112, H.113
- Chain M: T.5
- Ligands: CLA.125, CLA.134, BCR.138, SQD.197
11 PLIP interactions:10 interactions with chain H, 1 interactions with chain M,- Hydrophobic interactions: H:L.19, H:L.19, H:I.23, H:A.109, H:W.112, H:W.112
- pi-Stacking: H:W.112, H:H.113, H:H.113
- Metal complexes: H:H.113
- Hydrogen bonds: M:T.5
CLA.142: 14 residues within 4Å:- Chain I: L.72, G.148, S.149, L.152, H.214, L.217, F.259, A.273, Y.274
- Ligands: CLA.143, CLA.144, CLA.147, CLA.148, BCR.156
6 PLIP interactions:6 interactions with chain I,- Hydrophobic interactions: I:L.152, I:L.217, I:F.259
- Hydrogen bonds: I:Y.274
- pi-Cation interactions: I:H.214
- Metal complexes: I:H.214
CLA.143: 15 residues within 4Å:- Chain I: W.40, H.68, W.74, L.151, K.155, F.159, L.256, A.263, H.407, L.410, L.414
- Ligands: CLA.142, CLA.144, CLA.145, CLA.151
13 PLIP interactions:13 interactions with chain I,- Hydrophobic interactions: I:W.40, I:W.74, I:L.151, I:K.155, I:F.159, I:L.256, I:A.263, I:L.410, I:L.414
- Salt bridges: I:H.68
- pi-Stacking: I:H.407, I:H.407
- Metal complexes: I:H.407
CLA.144: 10 residues within 4Å:- Chain I: V.38, L.65, L.69, L.72, S.91, H.95
- Ligands: CLA.142, CLA.143, CLA.151, CLA.297
2 PLIP interactions:2 interactions with chain I,- Hydrophobic interactions: I:V.38
- pi-Stacking: I:H.95
CLA.145: 12 residues within 4Å:- Chain G: F.275
- Chain I: W.40, M.44, F.47, G.62, S.383, W.402
- Chain P: P.17
- Ligands: CLA.143, DGD.158, DGD.159, LMG.179
7 PLIP interactions:6 interactions with chain I, 1 interactions with chain G,- Hydrophobic interactions: I:W.40, I:W.402, I:W.402, I:W.402, I:W.402, G:F.275
- Hydrogen bonds: I:S.383
CLA.146: 13 residues within 4Å:- Chain G: L.110, W.121
- Chain I: V.242, Y.251, F.415, H.418, L.419, A.422, R.426
- Chain N: F.23
- Ligands: CLA.148, BCR.156, DGD.157
13 PLIP interactions:4 interactions with chain G, 9 interactions with chain I,- Hydrophobic interactions: G:L.110, G:W.121, G:W.121, G:W.121, I:Y.251, I:Y.251, I:F.415, I:F.415, I:L.419
- Hydrogen bonds: I:Y.251
- Salt bridges: I:R.426
- pi-Stacking: I:H.418, I:H.418
CLA.147: 14 residues within 4Å:- Chain I: L.138, G.224, W.227, H.228, T.231, K.232, P.233, F.234, W.236
- Ligands: CLA.142, CLA.148, BCR.156, LHG.161, LHG.162
5 PLIP interactions:5 interactions with chain I,- Hydrophobic interactions: I:L.138, I:W.227
- Hydrogen bonds: I:F.234
- Salt bridges: I:H.228
- Metal complexes: I:H.228
CLA.148: 13 residues within 4Å:- Chain I: M.134, L.138, H.141, L.142, L.217, W.243, Y.248, Y.251, S.252
- Ligands: CLA.142, CLA.146, CLA.147, CLA.150
7 PLIP interactions:7 interactions with chain I,- Hydrophobic interactions: I:M.134, I:L.138, I:L.217, I:Y.248, I:Y.251, I:Y.251
- Hydrogen bonds: I:H.141
CLA.149: 15 residues within 4Å:- Chain I: W.13, A.14, N.16, A.17, L.249, L.253, F.413, G.417, W.420, H.421, R.424
- Ligands: CLA.150, CLA.151, CLA.152, LHG.172
10 PLIP interactions:10 interactions with chain I,- Hydrophobic interactions: I:A.14, I:N.16, I:A.17, I:L.249, I:L.253, I:W.420, I:W.420
- Salt bridges: I:R.424
- pi-Stacking: I:W.420
- Metal complexes: I:H.421
CLA.150: 16 residues within 4Å:- Chain I: N.16, L.26, H.30, I.37, W.128, H.141, G.245, E.246, Y.248, L.249, S.252, L.256
- Ligands: CLA.148, CLA.149, CLA.151, CLA.153
8 PLIP interactions:8 interactions with chain I,- Hydrophobic interactions: I:N.16, I:L.26, I:W.128, I:Y.248, I:L.249, I:L.249
- Hydrogen bonds: I:S.252
- pi-Cation interactions: I:H.30
CLA.151: 11 residues within 4Å:- Chain I: H.33, L.36, I.37, W.40
- Chain P: P.20, F.24
- Ligands: CLA.143, CLA.144, CLA.149, CLA.150, CLA.152
6 PLIP interactions:1 interactions with chain P, 5 interactions with chain I,- Hydrophobic interactions: P:F.24, I:L.36, I:I.37, I:W.40, I:W.40
- pi-Stacking: I:H.33
CLA.152: 15 residues within 4Å:- Chain I: R.3, W.12, G.15, N.16, R.18, L.19, L.22, K.25, A.110, L.111
- Chain P: W.30, Q.31
- Ligands: CLA.149, CLA.151, BCR.178
9 PLIP interactions:4 interactions with chain P, 5 interactions with chain I,- Hydrophobic interactions: P:W.30, P:Q.31, I:W.12, I:L.19
- pi-Stacking: P:W.30, P:W.30
- Hydrogen bonds: I:R.18
- Salt bridges: I:R.3, I:K.25
CLA.153: 9 residues within 4Å:- Chain I: F.124, I.137, I.140, H.141, L.144
- Ligands: CLA.150, CLA.154, BCR.155, CLA.297
5 PLIP interactions:5 interactions with chain I,- Hydrophobic interactions: I:I.137, I:I.140, I:I.140
- pi-Stacking: I:H.141, I:H.141
CLA.154: 14 residues within 4Å:- Chain I: L.27, G.105, Y.108, H.109, P.114, L.117, F.121, F.124
- Ligands: CLA.153, BCR.155, LHG.160
- Chain f: P.18, D.19, G.20
10 PLIP interactions:9 interactions with chain I, 1 interactions with chain f,- Hydrophobic interactions: I:L.27, I:L.27, I:Y.108, I:L.117, I:F.121
- pi-Stacking: I:F.121, I:F.124
- pi-Cation interactions: I:H.109
- Metal complexes: I:H.109
- Hydrogen bonds: f:G.20
CLA.166: 19 residues within 4Å:- Chain G: M.173, F.196
- Chain J: P.138, V.141, V.145, I.171, F.174, W.180, T.181, H.186, V.190, V.193, S.271, A.272, V.275
- Ligands: CLA.111, CLA.112, CLA.113, PHO.164
8 PLIP interactions:8 interactions with chain J,- Hydrophobic interactions: J:P.138, J:F.174, J:T.181, J:V.190, J:V.193
- pi-Stacking: J:H.186
- pi-Cation interactions: J:H.186
- Metal complexes: J:H.186
CLA.167: 15 residues within 4Å:- Chain J: P.28, C.29, F.32, L.78, L.79, L.80, L.81, W.82, T.101, F.102, L.105, H.106, F.109
- Chain V: I.14
- Ligands: CLA.127
12 PLIP interactions:11 interactions with chain J, 1 interactions with chain V,- Hydrophobic interactions: J:P.28, J:F.32, J:W.82, J:L.105, J:F.109, V:I.14
- Hydrogen bonds: J:L.81
- pi-Stacking: J:F.32, J:F.102, J:F.102, J:H.106
- pi-Cation interactions: J:H.106
CLA.183: 9 residues within 4Å:- Chain C: M.61, L.164, K.167, N.171, L.174
- Chain U: A.35, F.38
- Ligands: CLA.46, CLA.47
7 PLIP interactions:4 interactions with chain C, 3 interactions with chain U,- Hydrophobic interactions: C:K.167, C:L.174, U:A.35, U:F.38, U:F.38
- Salt bridges: C:K.167, C:K.167
CLA.185: 6 residues within 4Å:- Chain H: V.186, F.189
- Chain V: A.1
- Ligands: CLA.121, LMG.140, BCR.175
4 PLIP interactions:1 interactions with chain V, 3 interactions with chain H,- Hydrophobic interactions: V:A.1, H:V.186, H:F.189, H:F.189
CLA.190: 19 residues within 4Å:- Chain X: P.140, A.143, V.147, M.173, I.174, F.176, Q.177, I.182, L.183, H.188, I.273, T.276, A.277, I.280
- Ligands: CLA.191, CLA.192, PHO.193, CLA.247, LHG.252
6 PLIP interactions:6 interactions with chain X,- Hydrophobic interactions: X:P.140, X:M.173, X:F.176, X:Q.177, X:I.182, X:L.183
CLA.191: 12 residues within 4Å:- Chain 0: M.187, V.190, G.195
- Chain X: I.166, T.169, F.170, M.173
- Ligands: CLA.190, PHO.193, CLA.247, PL9.250, LHG.252
1 PLIP interactions:1 interactions with chain X,- Hydrophobic interactions: X:F.170
CLA.192: 12 residues within 4Å:- Chain 0: F.146, V.164, I.167, F.168, I.171
- Chain X: M.189, V.192, A.193
- Ligands: CLA.190, PHO.244, CLA.247, LMG.254
3 PLIP interactions:2 interactions with chain 0, 1 interactions with chain X,- Hydrophobic interactions: 0:F.146, 0:I.171, X:V.192
CLA.194: 15 residues within 4Å:- Chain 4: Y.9
- Chain X: L.26, P.29, T.30, T.33, F.83, Y.84, P.85, I.86, W.87, L.104, H.108
- Ligands: BCR.195, LMG.222
- Chain b: F.15
10 PLIP interactions:9 interactions with chain X, 1 interactions with chain 4,- Hydrophobic interactions: X:P.29, X:T.30, X:F.83, X:W.87, X:L.104, 4:Y.9
- Hydrogen bonds: X:I.86
- pi-Stacking: X:H.108, X:H.108
- Metal complexes: X:H.108
CLA.200: 6 residues within 4Å:- Chain Y: V.186, F.189
- Ligands: CLA.201, LMG.220, BCR.256
- Chain c: A.1
3 PLIP interactions:3 interactions with chain Y,- Hydrophobic interactions: Y:V.186, Y:F.189, Y:F.189
CLA.201: 17 residues within 4Å:- Chain 3: F.41, I.45, L.46, Y.49
- Chain Y: G.188, F.189, P.191, G.196, S.199, H.200, A.203, L.207, F.246, F.249
- Ligands: CLA.200, CLA.202, DGD.257
12 PLIP interactions:2 interactions with chain 3, 10 interactions with chain Y,- Hydrophobic interactions: 3:I.45, 3:L.46, Y:F.189, Y:F.189, Y:H.200, Y:L.207, Y:F.246, Y:F.246, Y:F.246, Y:F.249
- pi-Cation interactions: Y:H.200
- Metal complexes: Y:H.200
CLA.202: 18 residues within 4Å:- Chain 3: F.38
- Chain Y: R.67, L.68, C.149, F.152, H.200, H.201, F.246, A.247, V.251, T.261
- Ligands: CLA.201, CLA.203, CLA.204, CLA.205, CLA.207, CLA.208, CLA.209
10 PLIP interactions:2 interactions with chain 3, 8 interactions with chain Y,- Hydrophobic interactions: 3:F.38, 3:F.38, Y:F.152, Y:F.152, Y:A.247
- Hydrogen bonds: Y:R.67
- Salt bridges: Y:R.67
- pi-Stacking: Y:H.200, Y:H.201
- Metal complexes: Y:H.201
CLA.203: 20 residues within 4Å:- Chain Y: W.32, F.60, F.64, R.67, V.244, A.248, V.251, F.450, H.454, F.457, A.458, F.461
- Ligands: CLA.202, CLA.204, CLA.205, CLA.206, CLA.209, CLA.211, CLA.212, CLA.214
13 PLIP interactions:13 interactions with chain Y,- Hydrophobic interactions: Y:W.32, Y:F.60, Y:F.64, Y:F.64, Y:V.244, Y:A.248, Y:V.251, Y:F.457, Y:F.457, Y:F.461, Y:F.461
- Salt bridges: Y:R.67
- pi-Stacking: Y:H.454
CLA.204: 18 residues within 4Å:- Chain Y: T.26, V.29, A.33, V.61, F.64, M.65, R.67, L.68, V.95, H.99, F.102, L.142
- Ligands: CLA.202, CLA.203, CLA.205, CLA.208, CLA.209, CLA.214
8 PLIP interactions:8 interactions with chain Y,- Hydrophobic interactions: Y:T.26, Y:V.29, Y:A.33, Y:V.95, Y:F.102, Y:L.142
- Salt bridges: Y:R.67
- pi-Cation interactions: Y:H.99
CLA.205: 19 residues within 4Å:- Chain Y: L.68, I.70, W.90, A.98, H.99, F.102, G.151, F.152, F.155, H.156, F.161, G.162, P.163
- Ligands: CLA.202, CLA.203, CLA.204, CLA.215, BCR.218, LHG.219
10 PLIP interactions:10 interactions with chain Y,- Hydrophobic interactions: Y:L.68, Y:I.70, Y:W.90, Y:F.102, Y:F.152, Y:F.155, Y:H.156, Y:F.161, Y:F.161
- pi-Stacking: Y:H.156
CLA.206: 15 residues within 4Å:- Chain 7: F.31
- Chain Y: W.32, M.36, Q.57, G.58, F.60, L.323, G.327, P.446, W.449, F.450
- Ligands: BCR.199, CLA.203, CLA.212, LMG.266
8 PLIP interactions:7 interactions with chain Y, 1 interactions with chain 7,- Hydrophobic interactions: Y:W.32, Y:F.60, Y:P.446, Y:W.449, Y:W.449, 7:F.31
- Hydrogen bonds: Y:G.327
- pi-Stacking: Y:F.60
CLA.207: 14 residues within 4Å:- Chain 0: F.109, I.112, M.115, L.116
- Chain Y: S.238, A.242, H.465, I.466, G.469, L.473
- Ligands: CLA.202, CLA.208, CLA.209, CLA.248
7 PLIP interactions:5 interactions with chain Y, 2 interactions with chain 0,- Hydrophobic interactions: Y:A.242, Y:I.466, 0:F.109, 0:I.112
- Hydrogen bonds: Y:S.238
- pi-Stacking: Y:H.465
- Metal complexes: Y:H.465
CLA.208: 13 residues within 4Å:- Chain 3: T.27, M.31
- Chain Y: F.138, A.211, F.214, H.215, P.220, P.221
- Ligands: CLA.202, CLA.204, CLA.207, CLA.209, BCR.256
7 PLIP interactions:7 interactions with chain Y,- Hydrophobic interactions: Y:F.138, Y:F.138, Y:A.211, Y:F.214, Y:F.214
- Salt bridges: Y:H.215
- Metal complexes: Y:H.215
CLA.209: 14 residues within 4Å:- Chain Y: L.134, F.138, H.141, L.142, M.230, V.236, S.239
- Ligands: CLA.202, CLA.203, CLA.204, CLA.207, CLA.208, CLA.211, CLA.214
5 PLIP interactions:5 interactions with chain Y,- Hydrophobic interactions: Y:L.134, Y:F.138, Y:M.230, Y:V.236
- Hydrogen bonds: Y:H.141
CLA.210: 16 residues within 4Å:- Chain Y: W.4, Y.5, R.6, V.7, H.8, T.9, F.461, F.463, G.464, W.467, H.468, R.471
- Ligands: CLA.211, CLA.212, CLA.213, LHG.251
13 PLIP interactions:13 interactions with chain Y,- Hydrophobic interactions: Y:W.4, Y:H.8, Y:T.9, Y:F.461, Y:F.463, Y:W.467
- Hydrogen bonds: Y:H.8, Y:T.9
- Salt bridges: Y:H.8, Y:R.471
- pi-Stacking: Y:W.467, Y:H.468
- Metal complexes: Y:H.468
CLA.211: 15 residues within 4Å:- Chain Y: H.8, V.11, L.18, H.22, H.25, T.26, I.233, L.237, S.240
- Ligands: CLA.203, CLA.209, CLA.210, CLA.212, CLA.213, CLA.214
10 PLIP interactions:10 interactions with chain Y,- Hydrophobic interactions: Y:V.11, Y:H.25, Y:T.26, Y:I.233, Y:L.237, Y:L.237
- Hydrogen bonds: Y:S.240
- Salt bridges: Y:H.22
- pi-Stacking: Y:H.22, Y:H.25
CLA.212: 10 residues within 4Å:- Chain Y: H.8, H.25, V.29, F.461
- Ligands: CLA.203, CLA.206, CLA.210, CLA.211, CLA.213, LHG.251
5 PLIP interactions:5 interactions with chain Y,- Hydrophobic interactions: Y:V.29, Y:F.461
- Salt bridges: Y:H.8
- pi-Stacking: Y:H.25, Y:H.25
CLA.213: 12 residues within 4Å:- Chain 8: L.13, F.21
- Chain Y: V.7, H.8, V.10, V.21
- Ligands: SQD.182, CLA.210, CLA.211, CLA.212, BCR.216, SQD.264
7 PLIP interactions:5 interactions with chain Y, 2 interactions with chain 8,- Hydrophobic interactions: Y:V.7, Y:V.21, 8:L.13, 8:F.21
- pi-Stacking: Y:H.8, Y:H.8
- Metal complexes: Y:H.8
CLA.214: 11 residues within 4Å:- Chain Y: L.19, H.22, I.23, I.137, H.141, L.144
- Ligands: CLA.203, CLA.204, CLA.209, CLA.211, CLA.215
4 PLIP interactions:4 interactions with chain Y,- Hydrophobic interactions: Y:I.137, Y:L.144
- Hydrogen bonds: Y:H.22
- pi-Stacking: Y:H.141
CLA.215: 11 residues within 4Å:- Chain 3: T.5, V.7
- Chain Y: L.19, I.23, A.109, W.112, H.113
- Ligands: SQD.118, CLA.205, CLA.214, BCR.218
11 PLIP interactions:10 interactions with chain Y, 1 interactions with chain 3,- Hydrophobic interactions: Y:L.19, Y:L.19, Y:I.23, Y:A.109, Y:W.112, Y:W.112, 3:V.7
- pi-Stacking: Y:W.112, Y:H.113, Y:H.113
- Metal complexes: Y:H.113
CLA.223: 14 residues within 4Å:- Chain Z: L.72, G.148, S.149, L.152, H.214, L.217, F.259, A.273, Y.274
- Ligands: CLA.224, CLA.225, CLA.228, CLA.229, BCR.237
6 PLIP interactions:6 interactions with chain Z,- Hydrophobic interactions: Z:L.152, Z:L.217, Z:F.259
- Hydrogen bonds: Z:Y.274
- pi-Cation interactions: Z:H.214
- Metal complexes: Z:H.214
CLA.224: 15 residues within 4Å:- Chain Z: W.40, H.68, W.74, L.151, K.155, F.159, L.256, A.263, H.407, L.410, L.414
- Ligands: CLA.223, CLA.225, CLA.226, CLA.232
13 PLIP interactions:13 interactions with chain Z,- Hydrophobic interactions: Z:W.40, Z:W.74, Z:L.151, Z:K.155, Z:F.159, Z:L.256, Z:A.263, Z:L.410, Z:L.414
- Salt bridges: Z:H.68
- pi-Stacking: Z:H.407, Z:H.407
- Metal complexes: Z:H.407
CLA.225: 10 residues within 4Å:- Chain Z: V.38, L.65, L.69, L.72, S.91, H.95
- Ligands: CLA.223, CLA.224, CLA.232, CLA.311
2 PLIP interactions:2 interactions with chain Z,- Hydrophobic interactions: Z:V.38
- pi-Stacking: Z:H.95
CLA.226: 12 residues within 4Å:- Chain 6: P.17
- Chain X: F.275
- Chain Z: W.40, M.44, F.47, G.62, S.383, W.402
- Ligands: CLA.224, DGD.239, DGD.259, LMG.262
7 PLIP interactions:6 interactions with chain Z, 1 interactions with chain X,- Hydrophobic interactions: Z:W.40, Z:W.402, Z:W.402, Z:W.402, Z:W.402, X:F.275
- Hydrogen bonds: Z:S.383
CLA.227: 15 residues within 4Å:- Chain 4: F.23
- Chain X: L.110, L.111, G.118, W.121
- Chain Z: V.242, Y.251, F.415, H.418, L.419, A.422, R.426
- Ligands: CLA.229, BCR.237, DGD.238
14 PLIP interactions:5 interactions with chain X, 9 interactions with chain Z,- Hydrophobic interactions: X:L.110, X:L.111, X:W.121, X:W.121, X:W.121, Z:Y.251, Z:Y.251, Z:F.415, Z:F.415, Z:L.419
- Hydrogen bonds: Z:Y.251
- Salt bridges: Z:R.426
- pi-Stacking: Z:H.418, Z:H.418
CLA.228: 14 residues within 4Å:- Chain Z: L.138, G.224, W.227, H.228, T.231, K.232, P.233, F.234, W.236
- Ligands: CLA.223, CLA.229, BCR.237, LHG.241, LHG.242
5 PLIP interactions:5 interactions with chain Z,- Hydrophobic interactions: Z:L.138, Z:W.227
- Hydrogen bonds: Z:F.234
- Salt bridges: Z:H.228
- Metal complexes: Z:H.228
CLA.229: 13 residues within 4Å:- Chain Z: M.134, L.138, H.141, L.142, L.217, W.243, Y.248, Y.251, S.252
- Ligands: CLA.223, CLA.227, CLA.228, CLA.231
7 PLIP interactions:7 interactions with chain Z,- Hydrophobic interactions: Z:M.134, Z:L.138, Z:L.217, Z:Y.248, Z:Y.251, Z:Y.251
- Hydrogen bonds: Z:H.141
CLA.230: 15 residues within 4Å:- Chain Z: W.13, A.14, N.16, A.17, L.249, L.253, F.413, G.417, W.420, H.421, R.424
- Ligands: CLA.231, CLA.232, CLA.233, LHG.253
10 PLIP interactions:10 interactions with chain Z,- Hydrophobic interactions: Z:A.14, Z:N.16, Z:A.17, Z:L.249, Z:L.253, Z:W.420, Z:W.420
- Salt bridges: Z:R.424
- pi-Stacking: Z:W.420
- Metal complexes: Z:H.421
CLA.231: 16 residues within 4Å:- Chain Z: N.16, L.26, H.30, I.37, W.128, H.141, G.245, E.246, Y.248, L.249, S.252, L.256
- Ligands: CLA.229, CLA.230, CLA.232, CLA.234
8 PLIP interactions:8 interactions with chain Z,- Hydrophobic interactions: Z:N.16, Z:L.26, Z:W.128, Z:Y.248, Z:L.249, Z:L.249
- Hydrogen bonds: Z:S.252
- pi-Cation interactions: Z:H.30
CLA.232: 12 residues within 4Å:- Chain 6: P.20, L.21, F.24
- Chain Z: H.33, L.36, I.37, W.40
- Ligands: CLA.224, CLA.225, CLA.230, CLA.231, CLA.233
7 PLIP interactions:5 interactions with chain Z, 2 interactions with chain 6,- Hydrophobic interactions: Z:L.36, Z:I.37, Z:W.40, Z:W.40, 6:L.21, 6:F.24
- pi-Stacking: Z:H.33
CLA.233: 15 residues within 4Å:- Chain 6: W.30, Q.31
- Chain Z: R.3, W.12, G.15, N.16, R.18, L.19, L.22, K.25, A.110, L.111
- Ligands: CLA.230, CLA.232, BCR.261
9 PLIP interactions:5 interactions with chain Z, 4 interactions with chain 6,- Hydrophobic interactions: Z:W.12, Z:L.19, 6:W.30, 6:Q.31
- Hydrogen bonds: Z:R.18
- Salt bridges: Z:R.3, Z:K.25
- pi-Stacking: 6:W.30, 6:W.30
CLA.234: 9 residues within 4Å:- Chain Z: F.124, I.137, I.140, H.141, L.144
- Ligands: CLA.231, CLA.235, BCR.236, CLA.311
5 PLIP interactions:5 interactions with chain Z,- Hydrophobic interactions: Z:I.137, Z:I.140, Z:I.140
- pi-Stacking: Z:H.141, Z:H.141
CLA.235: 14 residues within 4Å:- Chain Z: L.27, G.105, Y.108, H.109, P.114, L.117, F.121, F.124
- Ligands: CLA.234, BCR.236, LHG.240
- Chain g: P.18, D.19, G.20
10 PLIP interactions:9 interactions with chain Z, 1 interactions with chain g,- Hydrophobic interactions: Z:L.27, Z:L.27, Z:Y.108, Z:L.117, Z:F.121
- pi-Stacking: Z:F.121, Z:F.124
- pi-Cation interactions: Z:H.109
- Metal complexes: Z:H.109
- Hydrogen bonds: g:G.20
CLA.247: 19 residues within 4Å:- Chain 0: P.138, V.141, V.145, I.171, F.174, W.180, T.181, H.186, V.190, V.193, S.271, A.272, V.275
- Chain X: M.173, F.196
- Ligands: CLA.190, CLA.191, CLA.192, PHO.244
8 PLIP interactions:8 interactions with chain 0,- Hydrophobic interactions: 0:P.138, 0:F.174, 0:T.181, 0:V.190, 0:V.193
- pi-Stacking: 0:H.186
- pi-Cation interactions: 0:H.186
- Metal complexes: 0:H.186
CLA.248: 15 residues within 4Å:- Chain 0: P.28, C.29, F.32, L.78, L.79, L.80, L.81, W.82, T.101, F.102, L.105, H.106, F.109
- Ligands: CLA.207
- Chain c: I.14
12 PLIP interactions:11 interactions with chain 0, 1 interactions with chain c,- Hydrophobic interactions: 0:P.28, 0:F.32, 0:W.82, 0:L.105, 0:F.109, c:I.14
- Hydrogen bonds: 0:L.81
- pi-Stacking: 0:F.32, 0:F.102, 0:F.102, 0:H.106
- pi-Cation interactions: 0:H.106
CLA.269: 10 residues within 4Å:- Chain F: M.61, L.164, K.167, N.171, L.174
- Ligands: CLA.99, CLA.100
- Chain b: W.34, A.35, F.38
8 PLIP interactions:4 interactions with chain b, 4 interactions with chain F,- Hydrophobic interactions: b:W.34, b:A.35, b:F.38, b:F.38, F:K.167, F:L.174
- Salt bridges: F:K.167, F:K.167
CLA.272: 18 residues within 4Å:- Ligands: CLA.273, XAT.283
- Chain e: L.14, G.20, D.21, R.22, G.23, F.24, D.25, F.29, A.30, I.79, F.82, R.83, E.86, H.89, R.193, M.196
16 PLIP interactions:16 interactions with chain e,- Hydrophobic interactions: e:L.14, e:I.79, e:F.82, e:F.82, e:R.83, e:E.86, e:E.86, e:H.89, e:R.193
- Hydrogen bonds: e:R.22, e:G.23, e:F.24, e:R.193
- Salt bridges: e:R.83
- pi-Cation interactions: e:R.83, e:R.193
CLA.273: 7 residues within 4Å:- Chain H: S.217
- Ligands: CLA.272, CLA.278, XAT.283
- Chain e: R.81, C.85, H.89
3 PLIP interactions:3 interactions with chain e,- Salt bridges: e:R.81, e:R.81
- Metal complexes: e:H.89
CLA.274: 13 residues within 4Å:- Ligands: CHL.275, XAT.283, NEX.284
- Chain e: L.98, G.99, A.102, V.103, T.107, A.114, E.118, S.124, Y.125, F.126
8 PLIP interactions:8 interactions with chain e,- Hydrophobic interactions: e:L.98, e:A.102, e:V.103, e:A.114, e:Y.125
- Hydrogen bonds: e:E.118, e:F.126
- pi-Stacking: e:Y.125
CLA.278: 13 residues within 4Å:- Ligands: CLA.273
- Chain e: F.70, E.84, C.85, I.88, H.89, W.92, E.141, I.145, G.146, E.149, R.152, N.153
7 PLIP interactions:7 interactions with chain e,- Hydrophobic interactions: e:I.88, e:W.92, e:I.145, e:E.149, e:N.153
- Salt bridges: e:R.152
- pi-Cation interactions: e:R.152
CLA.279: 13 residues within 4Å:- Ligands: CHL.277, LUT.282
- Chain e: R.91, Y.163, P.164, G.165, F.169, L.174, A.175, K.181, L.184, Q.185, E.188
11 PLIP interactions:11 interactions with chain e,- Hydrophobic interactions: e:R.91, e:F.169, e:L.174, e:A.175, e:L.184, e:L.184, e:Q.185, e:E.188, e:E.188
- Hydrogen bonds: e:G.165
- Metal complexes: e:E.188
CLA.280: 5 residues within 4Å:- Ligands: LUT.282
- Chain e: R.183, K.190, H.191, L.194
3 PLIP interactions:3 interactions with chain e,- Hydrophobic interactions: e:H.191, e:L.194
- pi-Cation interactions: e:K.190
CLA.281: 7 residues within 4Å:- Chain e: V.201, I.204, Q.205, V.208, F.216, I.217, F.220
8 PLIP interactions:8 interactions with chain e,- Hydrophobic interactions: e:V.201, e:V.201, e:V.201, e:I.204, e:I.204, e:V.208, e:F.220, e:F.220
CLA.287: 19 residues within 4Å:- Ligands: CHL.286, CLA.288
- Chain f: L.31, G.37, D.38, Y.39, G.40, Y.41, D.42, P.43, F.44, L.46, S.47, F.53, Y.56, Y.59, E.60, R.176, M.179
20 PLIP interactions:20 interactions with chain f,- Hydrophobic interactions: f:Y.39, f:Y.41, f:D.42, f:P.43, f:F.44, f:F.44, f:F.44, f:L.46, f:F.53, f:Y.56, f:Y.59, f:R.176, f:R.176
- Hydrogen bonds: f:Y.39, f:Y.41, f:S.47
- Salt bridges: f:R.176
- pi-Stacking: f:Y.41
- pi-Cation interactions: f:R.176
- Metal complexes: f:E.60
CLA.288: 5 residues within 4Å:- Ligands: CLA.287, CLA.292
- Chain f: Y.56, Y.59, H.63
5 PLIP interactions:5 interactions with chain f,- Hydrophobic interactions: f:Y.59, f:Y.59
- Hydrogen bonds: f:Y.59
- pi-Stacking: f:H.63, f:H.63
CLA.289: 14 residues within 4Å:- Ligands: CHL.290
- Chain f: L.69, G.73, I.76, P.77, C.87, G.88, E.90, W.93, T.96, L.106, N.107, Y.108, F.109
6 PLIP interactions:6 interactions with chain f,- Hydrophobic interactions: f:L.69, f:I.76, f:W.93, f:Y.108, f:Y.108
- Hydrogen bonds: f:F.109
CLA.292: 9 residues within 4Å:- Ligands: CLA.288
- Chain f: G.58, I.62, H.63, W.66, E.132, Y.133, I.136, K.145
7 PLIP interactions:7 interactions with chain f,- Hydrophobic interactions: f:W.66, f:E.132, f:E.132, f:Y.133, f:I.136
- Salt bridges: f:K.145, f:K.145
CLA.293: 13 residues within 4Å:- Ligands: CLA.295
- Chain f: R.65, M.68, F.146, H.147, G.149, F.152, A.158, L.167, K.168, K.170, E.171, N.174
11 PLIP interactions:11 interactions with chain f,- Hydrophobic interactions: f:R.65, f:M.68, f:A.158, f:L.167, f:K.168, f:K.170, f:N.174
- Hydrogen bonds: f:G.149
- Salt bridges: f:H.147
- pi-Stacking: f:H.147
- Metal complexes: f:E.171
CLA.294: 9 residues within 4Å:- Ligands: LHG.160, CLA.295, LHG.298
- Chain f: W.8, V.169, K.170, K.173, N.174, L.177
11 PLIP interactions:11 interactions with chain f,- Hydrophobic interactions: f:K.173, f:L.177, f:L.177
- Hydrogen bonds: f:K.170, f:K.173
- Salt bridges: f:K.7, f:K.170, f:K.173
- pi-Cation interactions: f:K.173, f:K.173, f:K.173
CLA.295: 7 residues within 4Å:- Ligands: NEX.35, LHG.160, CLA.293, CLA.294
- Chain f: K.170, N.174, L.177
3 PLIP interactions:3 interactions with chain f,- Hydrophobic interactions: f:K.170, f:L.177
- Salt bridges: f:K.170
CLA.296: 13 residues within 4Å:- Ligands: CLA.297
- Chain f: F.180, L.183, G.184, I.187, Q.188, N.199, F.200, H.203, N.210, N.211, L.212, V.215
8 PLIP interactions:8 interactions with chain f,- Hydrophobic interactions: f:F.180, f:L.183, f:I.187, f:Q.188, f:F.200, f:L.212
- Hydrogen bonds: f:Q.188, f:L.212
CLA.297: 10 residues within 4Å:- Ligands: CLA.144, CLA.153, CLA.296
- Chain f: F.200, H.203, P.207, F.208, N.211, L.212, L.213
7 PLIP interactions:7 interactions with chain f,- Hydrophobic interactions: f:F.200, f:F.200, f:P.207, f:F.208
- Hydrogen bonds: f:N.211
- pi-Cation interactions: f:H.203
- Metal complexes: f:H.203
CLA.301: 19 residues within 4Å:- Ligands: CHL.300, CLA.302
- Chain g: L.31, G.37, D.38, Y.39, G.40, Y.41, D.42, P.43, F.44, L.46, S.47, F.53, Y.56, Y.59, E.60, R.176, M.179
20 PLIP interactions:20 interactions with chain g,- Hydrophobic interactions: g:Y.39, g:Y.41, g:D.42, g:P.43, g:F.44, g:F.44, g:F.44, g:L.46, g:F.53, g:Y.56, g:Y.59, g:R.176, g:R.176
- Hydrogen bonds: g:Y.39, g:Y.41, g:S.47
- Salt bridges: g:R.176
- pi-Stacking: g:Y.41
- pi-Cation interactions: g:R.176
- Metal complexes: g:E.60
CLA.302: 5 residues within 4Å:- Ligands: CLA.301, CLA.306
- Chain g: Y.56, Y.59, H.63
5 PLIP interactions:5 interactions with chain g,- Hydrophobic interactions: g:Y.59, g:Y.59
- Hydrogen bonds: g:Y.59
- pi-Stacking: g:H.63, g:H.63
CLA.303: 14 residues within 4Å:- Ligands: CHL.304
- Chain g: L.69, G.73, I.76, P.77, C.87, G.88, E.90, W.93, T.96, L.106, N.107, Y.108, F.109
6 PLIP interactions:6 interactions with chain g,- Hydrophobic interactions: g:L.69, g:I.76, g:W.93, g:Y.108, g:Y.108
- Hydrogen bonds: g:F.109
CLA.306: 9 residues within 4Å:- Ligands: CLA.302
- Chain g: G.58, I.62, H.63, W.66, E.132, Y.133, I.136, K.145
7 PLIP interactions:7 interactions with chain g,- Hydrophobic interactions: g:W.66, g:E.132, g:E.132, g:Y.133, g:I.136
- Salt bridges: g:K.145, g:K.145
CLA.307: 13 residues within 4Å:- Ligands: CLA.309
- Chain g: R.65, M.68, F.146, H.147, G.149, F.152, A.158, L.167, K.168, K.170, E.171, N.174
10 PLIP interactions:10 interactions with chain g,- Hydrophobic interactions: g:R.65, g:M.68, g:A.158, g:L.167, g:K.168, g:K.170
- Hydrogen bonds: g:G.149
- Salt bridges: g:H.147
- pi-Stacking: g:H.147
- Metal complexes: g:E.171
CLA.308: 9 residues within 4Å:- Ligands: LHG.240, CLA.309, LHG.312
- Chain g: W.8, V.169, K.170, K.173, N.174, L.177
11 PLIP interactions:11 interactions with chain g,- Hydrophobic interactions: g:K.173, g:L.177, g:L.177
- Hydrogen bonds: g:K.170, g:K.173
- Salt bridges: g:K.7, g:K.170, g:K.173
- pi-Cation interactions: g:K.173, g:K.173, g:K.173
CLA.309: 7 residues within 4Å:- Ligands: NEX.89, LHG.240, CLA.307, CLA.308
- Chain g: K.170, N.174, L.177
3 PLIP interactions:3 interactions with chain g,- Hydrophobic interactions: g:K.170, g:L.177
- Salt bridges: g:K.170
CLA.310: 13 residues within 4Å:- Ligands: CLA.311
- Chain g: F.180, L.183, G.184, I.187, Q.188, N.199, F.200, H.203, N.210, N.211, L.212, V.215
8 PLIP interactions:8 interactions with chain g,- Hydrophobic interactions: g:F.180, g:L.183, g:I.187, g:Q.188, g:F.200, g:L.212
- Hydrogen bonds: g:Q.188, g:L.212
CLA.311: 10 residues within 4Å:- Ligands: CLA.225, CLA.234, CLA.310
- Chain g: F.200, H.203, P.207, F.208, N.211, L.212, L.213
7 PLIP interactions:7 interactions with chain g,- Hydrophobic interactions: g:F.200, g:F.200, g:P.207, g:F.208
- Hydrogen bonds: g:N.211
- pi-Cation interactions: g:H.203
- Metal complexes: g:H.203
CLA.314: 18 residues within 4Å:- Ligands: CLA.315, XAT.325
- Chain h: L.14, G.20, D.21, R.22, G.23, F.24, D.25, F.29, A.30, I.79, F.82, R.83, E.86, H.89, R.193, M.196
16 PLIP interactions:16 interactions with chain h,- Hydrophobic interactions: h:L.14, h:I.79, h:F.82, h:F.82, h:R.83, h:E.86, h:E.86, h:H.89, h:R.193
- Hydrogen bonds: h:R.22, h:G.23, h:F.24, h:R.193
- Salt bridges: h:R.83
- pi-Cation interactions: h:R.83, h:R.193
CLA.315: 7 residues within 4Å:- Chain Y: S.217
- Ligands: CLA.314, CLA.320, XAT.325
- Chain h: R.81, C.85, H.89
3 PLIP interactions:3 interactions with chain h,- Salt bridges: h:R.81, h:R.81
- Metal complexes: h:H.89
CLA.316: 13 residues within 4Å:- Ligands: NEX.54, CHL.317, XAT.325
- Chain h: L.98, G.99, A.102, V.103, T.107, A.114, E.118, S.124, Y.125, F.126
8 PLIP interactions:8 interactions with chain h,- Hydrophobic interactions: h:L.98, h:A.102, h:V.103, h:A.114, h:Y.125
- Hydrogen bonds: h:E.118, h:F.126
- pi-Stacking: h:Y.125
CLA.320: 13 residues within 4Å:- Ligands: CLA.315
- Chain h: F.70, E.84, C.85, I.88, H.89, W.92, E.141, I.145, G.146, E.149, R.152, N.153
7 PLIP interactions:7 interactions with chain h,- Hydrophobic interactions: h:I.88, h:W.92, h:I.145, h:E.149, h:N.153
- Salt bridges: h:R.152
- pi-Cation interactions: h:R.152
CLA.321: 13 residues within 4Å:- Ligands: CHL.319, LUT.324
- Chain h: R.91, Y.163, P.164, G.165, F.169, L.174, A.175, K.181, L.184, Q.185, E.188
11 PLIP interactions:11 interactions with chain h,- Hydrophobic interactions: h:R.91, h:F.169, h:L.174, h:A.175, h:L.184, h:L.184, h:Q.185, h:E.188, h:E.188
- Hydrogen bonds: h:G.165
- Metal complexes: h:E.188
CLA.322: 5 residues within 4Å:- Ligands: LUT.324
- Chain h: R.183, K.190, H.191, L.194
3 PLIP interactions:3 interactions with chain h,- Hydrophobic interactions: h:H.191, h:L.194
- pi-Cation interactions: h:K.190
CLA.323: 7 residues within 4Å:- Chain h: V.201, I.204, Q.205, V.208, F.216, I.217, F.220
8 PLIP interactions:8 interactions with chain h,- Hydrophobic interactions: h:V.201, h:V.201, h:V.201, h:I.204, h:I.204, h:V.208, h:F.220, h:F.220
- 12 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
LUT.15: 14 residues within 4Å:- Chain A: L.62, G.63, A.64, C.67, W.85, F.86, M.179, F.182, F.183
- Ligands: CLA.4, CHL.7, CLA.10, LUT.16, NEX.18
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.62, A:W.85, A:F.182, A:F.182, A:F.183
- Hydrogen bonds: A:W.85
LUT.16: 17 residues within 4Å:- Chain A: W.34, D.35, T.36, A.37, A.60, C.67, W.85, M.176, F.177, M.179
- Ligands: CHL.1, CLA.2, CLA.3, CLA.4, CHL.6, CHL.7, LUT.15
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:W.34, A:W.34, A:W.34, A:A.60
- Hydrogen bonds: A:T.36, A:T.36, A:A.37, A:W.85
LUT.33: 13 residues within 4Å:- Chain B: L.62, G.63, A.64, C.67, W.85, F.86, M.179, F.182, F.183
- Ligands: CLA.23, CHL.25, CLA.28, NEX.35
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:L.62, B:W.85, B:F.182, B:F.182, B:F.183
- Hydrogen bonds: B:W.85
LUT.50: 13 residues within 4Å:- Chain C: L.62, G.63, A.64, C.67, W.85, F.86, M.179, F.182, F.183
- Ligands: CLA.40, CHL.43, CLA.46, NEX.52
6 PLIP interactions:6 interactions with chain C- Hydrophobic interactions: C:L.62, C:W.85, C:F.182, C:F.182, C:F.183
- Hydrogen bonds: C:W.85
LUT.69: 13 residues within 4Å:- Chain D: L.62, G.63, A.64, C.67, W.85, F.86, M.179, F.182, F.183
- Ligands: CLA.58, CHL.61, CLA.64, LUT.70
6 PLIP interactions:6 interactions with chain D- Hydrophobic interactions: D:L.62, D:W.85, D:F.182, D:F.182, D:F.183
- Hydrogen bonds: D:W.85
LUT.70: 14 residues within 4Å:- Chain D: W.34, D.35, T.36, A.60, C.67, W.85, M.176, M.179
- Ligands: CLA.56, CLA.57, CLA.58, CHL.60, CHL.61, LUT.69
7 PLIP interactions:7 interactions with chain D- Hydrophobic interactions: D:W.34, D:A.60, D:M.176, D:M.179
- Hydrogen bonds: D:T.36, D:T.36, D:W.85
LUT.86: 14 residues within 4Å:- Chain E: L.62, G.63, A.64, C.67, W.85, F.86, M.179, F.182, F.183
- Ligands: CLA.76, CHL.78, CLA.81, LUT.87, NEX.89
6 PLIP interactions:6 interactions with chain E- Hydrophobic interactions: E:L.62, E:W.85, E:F.182, E:F.182, E:F.183
- Hydrogen bonds: E:W.85
LUT.87: 16 residues within 4Å:- Chain E: W.34, D.35, T.36, A.37, A.60, C.67, W.85, M.176, M.179
- Ligands: CHL.73, CLA.74, CLA.75, CLA.76, CHL.77, CHL.78, LUT.86
7 PLIP interactions:7 interactions with chain E- Hydrophobic interactions: E:W.34, E:A.60, E:M.176
- Hydrogen bonds: E:T.36, E:T.36, E:A.37, E:W.85
LUT.103: 14 residues within 4Å:- Chain F: L.62, G.63, A.64, C.67, W.85, F.86, M.179, F.182, F.183
- Ligands: CLA.94, CHL.96, CLA.99, LUT.104, NEX.106
6 PLIP interactions:6 interactions with chain F- Hydrophobic interactions: F:L.62, F:W.85, F:F.182, F:F.182, F:F.183
- Hydrogen bonds: F:W.85
LUT.104: 14 residues within 4Å:- Chain F: W.34, D.35, T.36, A.60, C.67, M.176, M.179
- Ligands: CHL.91, CLA.92, CLA.93, CLA.94, CHL.95, CHL.96, LUT.103
5 PLIP interactions:5 interactions with chain F- Hydrophobic interactions: F:A.60, F:M.176
- Hydrogen bonds: F:T.36, F:T.36, F:W.85
LUT.282: 7 residues within 4Å:- Ligands: CLA.279, CLA.280
- Chain e: F.169, D.170, P.171, L.172, H.191
1 PLIP interactions:1 interactions with chain e- Hydrophobic interactions: e:L.172
LUT.324: 7 residues within 4Å:- Ligands: CLA.321, CLA.322
- Chain h: F.169, D.170, P.171, L.172, H.191
1 PLIP interactions:1 interactions with chain h- Hydrophobic interactions: h:L.172
- 8 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
XAT.17: 8 residues within 4Å:- Chain A: W.210, Y.212, A.213
- Chain C: W.116
- Ligands: CHL.1, CLA.11, LHG.19, CHL.43
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:W.210, A:A.213
XAT.34: 6 residues within 4Å:- Chain B: A.209, Y.212, A.213
- Ligands: CHL.20, CLA.29, LHG.36
No protein-ligand interaction detected (PLIP)XAT.51: 8 residues within 4Å:- Chain B: W.116
- Chain C: A.209, W.210, Y.212, A.213
- Ligands: CHL.25, CLA.48, LHG.53
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:A.209, C:W.210, C:A.213
XAT.71: 7 residues within 4Å:- Chain D: W.210, Y.212, A.213
- Chain F: W.116
- Ligands: CHL.55, LHG.72, CHL.96
2 PLIP interactions:2 interactions with chain D- Hydrophobic interactions: D:W.210, D:A.213
XAT.88: 6 residues within 4Å:- Chain D: W.116
- Chain E: Y.212, A.213
- Ligands: CHL.61, CHL.73, LHG.90
No protein-ligand interaction detected (PLIP)XAT.105: 8 residues within 4Å:- Chain F: A.209, W.210, Y.212, A.213
- Ligands: CHL.78, CLA.100, CLA.101, LHG.107
3 PLIP interactions:3 interactions with chain F- Hydrophobic interactions: F:A.209, F:W.210, F:A.213
XAT.283: 17 residues within 4Å:- Ligands: LMG.140, CLA.272, CLA.273, CLA.274, CHL.275, CHL.276
- Chain e: D.25, P.26, F.29, H.89, W.92, A.93, G.96, W.111, A.114, M.196, F.199
8 PLIP interactions:8 interactions with chain e- Hydrophobic interactions: e:P.26, e:F.29, e:W.92, e:F.199, e:F.199, e:F.199
- Hydrogen bonds: e:D.25, e:W.111
XAT.325: 17 residues within 4Å:- Ligands: LMG.220, CLA.314, CLA.315, CLA.316, CHL.317, CHL.318
- Chain h: D.25, P.26, F.29, H.89, W.92, A.93, G.96, W.111, A.114, M.196, F.199
8 PLIP interactions:8 interactions with chain h- Hydrophobic interactions: h:P.26, h:F.29, h:W.92, h:F.199, h:F.199, h:F.199
- Hydrogen bonds: h:D.25, h:W.111
- 7 x NEX: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL(Non-covalent)
NEX.18: 7 residues within 4Å:- Chain A: Y.100, L.122, V.126
- Ligands: CLA.4, CHL.6, CHL.8, LUT.15
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:L.122, A:V.126
- Hydrogen bonds: A:Y.100
NEX.35: 9 residues within 4Å:- Chain B: Y.100, L.122, V.126, P.135
- Ligands: CLA.23, CHL.24, CHL.26, LUT.33, CLA.295
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:L.122, B:L.122, B:V.126, B:P.135
- Hydrogen bonds: B:Y.100
NEX.52: 9 residues within 4Å:- Chain C: Y.100, L.122, V.126, P.135
- Ligands: CLA.40, CHL.42, CHL.44, LUT.50
- Chain h: P.171
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain h- Hydrophobic interactions: C:V.126, C:P.135
- Hydrogen bonds: C:Y.100, h:P.171
NEX.54: 7 residues within 4Å:- Chain C: P.151, L.152
- Ligands: CLA.316, CHL.317, CHL.319
- Chain h: Y.125, V.144
3 PLIP interactions:2 interactions with chain h, 1 interactions with chain C- Hydrophobic interactions: h:V.144
- Hydrogen bonds: h:Y.125, C:P.151
NEX.89: 9 residues within 4Å:- Chain E: Y.100, L.122, V.126, Y.129
- Ligands: CLA.76, CHL.77, CHL.79, LUT.86, CLA.309
4 PLIP interactions:4 interactions with chain E- Hydrophobic interactions: E:L.122, E:L.122, E:V.126
- Hydrogen bonds: E:Y.100
NEX.106: 8 residues within 4Å:- Chain F: L.122, V.126, P.135
- Ligands: CLA.94, CHL.95, CHL.97, LUT.103
- Chain e: P.171
3 PLIP interactions:3 interactions with chain F- Hydrophobic interactions: F:V.126, F:P.135
- Hydrogen bonds: F:Y.100
NEX.284: 7 residues within 4Å:- Chain F: P.151, L.152
- Ligands: CLA.274, CHL.275, CHL.277
- Chain e: Y.125, V.144
3 PLIP interactions:2 interactions with chain e, 1 interactions with chain F- Hydrophobic interactions: e:V.144
- Hydrogen bonds: e:Y.125, F:P.151
- 26 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Covalent)
LHG.19: 9 residues within 4Å:- Chain A: W.4, Y.32, K.170, F.177, G.181
- Ligands: CHL.1, CLA.11, CLA.13, XAT.17
Ligand excluded by PLIPLHG.36: 11 residues within 4Å:- Chain B: W.4, Y.32, K.170, L.174, F.177, G.181
- Ligands: CHL.9, CHL.20, CLA.29, CLA.31, XAT.34
Ligand excluded by PLIPLHG.53: 11 residues within 4Å:- Chain C: W.4, Y.32, K.170, F.177, G.181
- Ligands: CHL.27, CHL.37, CLA.47, CLA.48, CLA.49, XAT.51
Ligand excluded by PLIPLHG.72: 10 residues within 4Å:- Chain D: W.4, Y.32, K.170, L.174, F.177, G.181
- Ligands: CHL.55, CLA.65, CLA.67, XAT.71
Ligand excluded by PLIPLHG.90: 11 residues within 4Å:- Chain E: W.4, V.10, Y.32, K.170, L.174, F.177, G.181
- Ligands: CHL.73, CLA.82, CLA.84, XAT.88
Ligand excluded by PLIPLHG.107: 10 residues within 4Å:- Chain F: W.4, Y.32, K.170, L.174, F.177, G.181
- Ligands: CHL.91, CLA.100, CLA.101, XAT.105
Ligand excluded by PLIPLHG.139: 5 residues within 4Å:- Chain H: W.90
- Ligands: CLA.125, DGD.186, LMG.258, LHG.271
Ligand excluded by PLIPLHG.160: 8 residues within 4Å:- Chain I: F.123
- Ligands: CLA.154, CHL.286, CLA.294, CLA.295, LHG.298
- Chain f: K.7, R.14
Ligand excluded by PLIPLHG.161: 10 residues within 4Å:- Chain I: A.235, W.236, R.239
- Chain U: F.27, G.31, W.34, S.42
- Ligands: CLA.47, CLA.147, LHG.162
Ligand excluded by PLIPLHG.162: 6 residues within 4Å:- Chain I: F.234, A.235, W.236
- Ligands: CLA.47, CLA.147, LHG.161
Ligand excluded by PLIPLHG.170: 14 residues within 4Å:- Chain G: S.222, N.224
- Chain H: Y.5, R.6, F.463, W.467
- Chain J: Y.130, F.258, F.262, T.266, W.269
- Ligands: CLA.130, CLA.132, LHG.181
Ligand excluded by PLIPLHG.171: 15 residues within 4Å:- Chain J: F.246, V.248, A.249, F.250, S.251, W.255
- Chain Q: N.13, T.15, W.19
- Chain T: T.13, I.17, I.21
- Ligands: CLA.112, PHO.114, PL9.169
Ligand excluded by PLIPLHG.172: 11 residues within 4Å:- Chain G: R.130, W.132, F.263
- Chain I: W.13
- Chain J: E.208, A.218, N.219, T.220, F.221
- Ligands: CLA.149, SQD.165
Ligand excluded by PLIPLHG.181: 17 residues within 4Å:- Chain G: S.222, N.224
- Chain H: W.4, Y.5
- Chain J: W.255, F.258, F.262
- Chain Q: E.11, L.12, N.13, S.16, W.19, G.20
- Chain R: P.18
- Ligands: CLA.132, PL9.169, LHG.170
Ligand excluded by PLIPLHG.219: 5 residues within 4Å:- Chain Y: W.90
- Ligands: DGD.120, LMG.198, CLA.205, LHG.313
Ligand excluded by PLIPLHG.240: 8 residues within 4Å:- Chain Z: F.123
- Ligands: CLA.235, CHL.300, CLA.308, CLA.309, LHG.312
- Chain g: K.7, R.14
Ligand excluded by PLIPLHG.241: 11 residues within 4Å:- Chain Z: A.235, W.236, R.239
- Ligands: CLA.100, CLA.228, LHG.242
- Chain b: F.27, G.28, G.31, W.34, Y.37
Ligand excluded by PLIPLHG.242: 6 residues within 4Å:- Chain Z: F.234, A.235, W.236
- Ligands: CLA.100, CLA.228, LHG.241
Ligand excluded by PLIPLHG.251: 14 residues within 4Å:- Chain 0: Y.130, F.258, F.262, T.266, W.269
- Chain X: S.222, N.224
- Chain Y: W.4, Y.5, R.6, W.467
- Ligands: CLA.210, CLA.212, LHG.265
Ligand excluded by PLIPLHG.252: 17 residues within 4Å:- Chain 0: F.246, V.248, A.249, F.250, S.251, W.255
- Chain 7: N.13, T.15, Y.18, W.19
- Ligands: CLA.190, CLA.191, PHO.193, PL9.250
- Chain a: T.13, I.17, I.21
Ligand excluded by PLIPLHG.253: 11 residues within 4Å:- Chain 0: E.208, A.218, N.219, T.220, F.221
- Chain X: R.130, W.132, F.263
- Chain Z: W.13
- Ligands: CLA.230, SQD.245
Ligand excluded by PLIPLHG.265: 20 residues within 4Å:- Chain 0: W.255, F.258, F.262
- Chain 7: E.11, L.12, N.13, S.16, W.19, G.20
- Chain 8: V.17, P.18, F.21, L.22
- Chain X: S.222, N.224
- Chain Y: P.3, W.4, Y.5
- Ligands: PL9.250, LHG.251
Ligand excluded by PLIPLHG.271: 9 residues within 4Å:- Chain H: F.155, L.160, F.161
- Ligands: LHG.139
- Chain e: L.119, L.134, T.135, I.138, W.139
Ligand excluded by PLIPLHG.298: 8 residues within 4Å:- Ligands: LHG.160, CHL.286, CLA.294
- Chain f: R.14, Y.39, K.173, L.177, F.180
Ligand excluded by PLIPLHG.312: 8 residues within 4Å:- Ligands: LHG.240, CHL.300, CLA.308
- Chain g: R.14, Y.39, K.173, L.177, F.180
Ligand excluded by PLIPLHG.313: 9 residues within 4Å:- Chain Y: F.155, L.160, F.161
- Ligands: LHG.219
- Chain h: L.119, L.134, T.135, I.138, W.139
Ligand excluded by PLIP- 2 x OEX: CA-MN4-O5 CLUSTER(Non-covalent)
OEX.108: 10 residues within 4Å:- Chain G: Q.155, D.160, E.179, H.322, E.323, H.327, D.332, A.334
- Chain I: E.331, R.334
11 PLIP interactions:8 interactions with chain G, 3 interactions with chain I- Hydrogen bonds: G:S.159, I:R.334, I:R.334
- Metal complexes: G:D.160, G:E.179, G:H.322, G:E.323, G:D.332, G:D.332, G:A.334, I:E.331
OEX.187: 10 residues within 4Å:- Chain X: Q.155, D.160, E.179, H.322, E.323, H.327, D.332, A.334
- Chain Z: E.331, R.334
11 PLIP interactions:3 interactions with chain Z, 8 interactions with chain X- Hydrogen bonds: Z:R.334, Z:R.334, X:S.159
- Metal complexes: Z:E.331, X:D.160, X:E.179, X:H.322, X:E.323, X:D.332, X:D.332, X:A.334
- 2 x FE2: FE (II) ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.110: 3 residues within 4Å:- Chain G: H.322, E.323
- Chain J: K.306
Ligand excluded by PLIPCL.141: 3 residues within 4Å:- Chain G: F.329
- Chain I: Q.290, A.291
Ligand excluded by PLIPCL.189: 2 residues within 4Å:- Chain X: H.322, E.323
Ligand excluded by PLIPCL.221: 3 residues within 4Å:- Chain X: F.329
- Chain Z: Q.290, A.291
Ligand excluded by PLIP- 4 x PHO: PHEOPHYTIN A(Non-covalent)
PHO.114: 13 residues within 4Å:- Chain G: A.34, T.35, Y.116, E.120, Y.137, L.164, G.165, I.273
- Chain J: L.198, F.246
- Ligands: CLA.111, CLA.112, LHG.171
8 PLIP interactions:8 interactions with chain G- Hydrophobic interactions: G:A.34, G:Y.116, G:Y.137, G:Y.137, G:L.164, G:I.273
- Hydrogen bonds: G:Y.116, G:Y.137
PHO.164: 16 residues within 4Å:- Chain G: L.200, M.204
- Chain J: W.37, G.110, L.111, F.114, Q.118, N.131, F.135, F.162, G.163, V.164, I.167, L.268
- Ligands: CLA.113, CLA.166
13 PLIP interactions:12 interactions with chain J, 1 interactions with chain G- Hydrophobic interactions: J:W.37, J:W.37, J:W.37, J:L.111, J:F.114, J:F.135, J:V.164, J:I.167, J:L.268, G:L.200
- Hydrogen bonds: J:Q.118, J:N.131
- pi-Stacking: J:F.135
PHO.193: 14 residues within 4Å:- Chain 0: L.194, L.198, F.246
- Chain X: A.34, T.35, Y.116, E.120, Y.137, L.164, G.165, I.273
- Ligands: CLA.190, CLA.191, LHG.252
9 PLIP interactions:8 interactions with chain X, 1 interactions with chain 0- Hydrophobic interactions: X:A.34, X:Y.116, X:Y.137, X:Y.137, X:L.164, X:I.273, 0:L.194
- Hydrogen bonds: X:Y.116, X:Y.137
PHO.244: 16 residues within 4Å:- Chain 0: W.37, G.110, L.111, F.114, Q.118, N.131, F.135, P.138, F.162, G.163, V.164, L.268
- Chain X: L.200, M.204
- Ligands: CLA.192, CLA.247
13 PLIP interactions:12 interactions with chain 0, 1 interactions with chain X- Hydrophobic interactions: 0:W.37, 0:W.37, 0:W.37, 0:L.111, 0:F.114, 0:F.135, 0:F.162, 0:V.164, 0:L.268, X:L.200
- Hydrogen bonds: 0:Q.118, 0:N.131
- pi-Stacking: 0:F.135
- 22 x BCR: BETA-CAROTENE(Non-covalent)
BCR.116: 12 residues within 4Å:- Chain G: L.32, T.33, S.36, I.40, A.44, V.92, L.96
- Chain N: F.15
- Ligands: CLA.115, SQD.118, DGD.120, LMG.198
Ligand excluded by PLIPBCR.136: 7 residues within 4Å:- Chain H: M.24, L.28, I.111
- Ligands: CLA.133, BCR.137, SQD.263, BCR.268
Ligand excluded by PLIPBCR.137: 8 residues within 4Å:- Chain H: L.28, G.31, W.32, S.35, I.100, V.101
- Ligands: BCR.136, BCR.268
Ligand excluded by PLIPBCR.138: 8 residues within 4Å:- Chain H: L.105, L.108, A.109, W.112, L.115
- Ligands: CLA.125, CLA.135, SQD.197
Ligand excluded by PLIPBCR.155: 10 residues within 4Å:- Chain I: V.93, I.97, S.98, V.101, L.102
- Chain W: G.55, N.58
- Ligands: CLA.153, CLA.154
- Chain f: L.213
Ligand excluded by PLIPBCR.156: 9 residues within 4Å:- Chain I: L.186, L.190, I.210, G.213, H.214
- Chain N: L.24
- Ligands: CLA.142, CLA.146, CLA.147
Ligand excluded by PLIPBCR.168: 9 residues within 4Å:- Chain J: Y.31, F.32, G.35, F.38, T.39
- Chain L: P.14, T.15, F.18
- Ligands: LMG.173
Ligand excluded by PLIPBCR.175: 7 residues within 4Å:- Chain M: A.34, L.37, F.38, F.41
- Chain V: T.2
- Ligands: CLA.128, CLA.185
Ligand excluded by PLIPBCR.177: 11 residues within 4Å:- Chain O: G.13
- Chain P: I.19, L.22, F.23, L.25, L.26, F.28, V.29
- Chain W: S.16, L.20
- Ligands: BCR.178
Ligand excluded by PLIPBCR.178: 11 residues within 4Å:- Chain I: A.32, L.36, L.96, I.97, A.100, G.103
- Chain P: L.9, F.23
- Chain W: S.16
- Ligands: CLA.152, BCR.177
Ligand excluded by PLIPBCR.195: 11 residues within 4Å:- Chain 4: F.15
- Chain X: L.32, T.33, S.36, I.40, A.44, V.92, L.96
- Ligands: CLA.194, SQD.197, LMG.258
Ligand excluded by PLIPBCR.199: 10 residues within 4Å:- Chain T: V.11, G.15, F.18
- Chain Y: W.32, S.35, M.36
- Ligands: SQD.118, CLA.206, BCR.216, BCR.217
Ligand excluded by PLIPBCR.216: 7 residues within 4Å:- Chain Y: M.24, L.28, I.111
- Ligands: SQD.182, BCR.199, CLA.213, BCR.217
Ligand excluded by PLIPBCR.217: 8 residues within 4Å:- Chain Y: L.28, G.31, W.32, S.35, I.100, V.101
- Ligands: BCR.199, BCR.216
Ligand excluded by PLIPBCR.218: 8 residues within 4Å:- Chain Y: L.105, L.108, A.109, W.112, L.115
- Ligands: SQD.118, CLA.205, CLA.215
Ligand excluded by PLIPBCR.236: 10 residues within 4Å:- Chain Z: V.93, I.97, S.98, V.101, L.102
- Ligands: CLA.234, CLA.235
- Chain d: G.55, N.58
- Chain g: L.213
Ligand excluded by PLIPBCR.237: 8 residues within 4Å:- Chain Z: L.186, L.190, I.210, G.213, H.214
- Ligands: CLA.223, CLA.227, CLA.228
Ligand excluded by PLIPBCR.249: 10 residues within 4Å:- Chain 0: Y.31, F.32, G.35, F.38, T.39
- Chain 2: P.14, F.18
- Chain 5: V.16, I.20
- Ligands: LMG.254
Ligand excluded by PLIPBCR.256: 6 residues within 4Å:- Chain 3: A.34, L.37, F.38, F.41
- Ligands: CLA.200, CLA.208
Ligand excluded by PLIPBCR.260: 11 residues within 4Å:- Chain 6: M.16, I.19, L.22, F.23, L.25, L.26, F.28, V.29
- Ligands: BCR.261
- Chain d: S.16, L.20
Ligand excluded by PLIPBCR.261: 11 residues within 4Å:- Chain 6: F.23, A.27
- Chain Z: A.32, L.36, L.96, I.97, A.100, G.103
- Ligands: CLA.233, BCR.260
- Chain d: S.16
Ligand excluded by PLIPBCR.268: 10 residues within 4Å:- Chain H: W.32, S.35, M.36
- Ligands: CLA.126, BCR.136, BCR.137, SQD.197
- Chain a: V.11, G.15, F.18
Ligand excluded by PLIP- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
PL9.117: 7 residues within 4Å:- Chain G: H.205, L.208, H.242, F.245, S.254, F.255, L.261
5 PLIP interactions:5 interactions with chain G- Hydrophobic interactions: G:H.205, G:L.208, G:H.242, G:F.245, G:L.261
PL9.169: 19 residues within 4Å:- Chain G: F.38, F.42
- Chain J: M.187, M.188, G.192, L.198, L.199, I.202, H.203, T.206, W.242, A.249, F.250
- Chain Q: V.26, L.30
- Chain T: L.10
- Ligands: CLA.112, LHG.171, LHG.181
12 PLIP interactions:8 interactions with chain J, 1 interactions with chain Q, 1 interactions with chain T, 2 interactions with chain G- Hydrophobic interactions: J:M.188, J:L.198, J:I.202, J:W.242, J:F.250, J:F.250, Q:L.30, T:L.10, G:F.38, G:F.42
- Hydrogen bonds: J:H.203, J:F.250
PL9.196: 7 residues within 4Å:- Chain X: H.205, L.208, H.242, F.245, S.254, F.255, L.261
5 PLIP interactions:5 interactions with chain X- Hydrophobic interactions: X:H.205, X:L.208, X:H.242, X:F.245, X:L.261
PL9.250: 18 residues within 4Å:- Chain 0: M.187, M.188, G.192, L.198, L.199, I.202, H.203, T.206, W.242, A.249, F.250
- Chain 7: V.26
- Chain X: F.38, F.42
- Ligands: CLA.191, LHG.252, LHG.265
- Chain a: L.10
12 PLIP interactions:8 interactions with chain 0, 1 interactions with chain 7, 2 interactions with chain X, 1 interactions with chain a- Hydrophobic interactions: 0:M.188, 0:L.198, 0:I.202, 0:W.242, 0:F.250, 0:F.250, 7:V.26, X:F.38, X:F.42, a:L.10
- Hydrogen bonds: 0:H.203, 0:F.250
- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)(Covalent)
SQD.118: 10 residues within 4Å:- Chain G: W.10, N.16, R.17, L.18, I.20, L.32
- Ligands: BCR.116, BCR.199, CLA.215, BCR.218
3 PLIP interactions:3 interactions with chain G- Hydrophobic interactions: G:N.16, G:I.20, G:L.32
SQD.165: 14 residues within 4Å:- Chain G: F.255, N.257, S.260, F.263, W.268
- Chain I: Q.5, A.11, W.12, W.13
- Chain J: N.219, F.221, R.222
- Chain P: F.36
- Ligands: LHG.172
11 PLIP interactions:4 interactions with chain J, 5 interactions with chain G, 1 interactions with chain P, 1 interactions with chain I- Hydrophobic interactions: J:F.221, G:F.263, G:W.268, P:F.36
- Hydrogen bonds: J:N.219, J:F.221, J:R.222, G:N.257, G:S.260, G:S.260, I:Q.5
SQD.180: 5 residues within 4Å:- Chain 8: V.30
- Chain Q: E.7, Q.8
- Ligands: CLA.133, SQD.263
5 PLIP interactions:3 interactions with chain Q, 2 interactions with chain R- Hydrogen bonds: Q:Q.8, Q:Q.8, Q:N.9
- Salt bridges: R:K.28, R:K.28
SQD.182: 11 residues within 4Å:- Chain Q: R.14, Y.18
- Chain T: I.16, F.19, F.23, R.24, E.25
- Chain Y: W.114
- Ligands: CLA.213, BCR.216, SQD.264
6 PLIP interactions:2 interactions with chain Q, 1 interactions with chain Y, 3 interactions with chain T- Hydrophobic interactions: Q:Y.18, T:I.16, T:F.19, T:F.19
- Salt bridges: Q:R.14
- Hydrogen bonds: Y:W.114
SQD.197: 11 residues within 4Å:- Chain H: W.112
- Chain X: W.10, N.16, R.17, L.18, I.20, L.32
- Ligands: CLA.135, BCR.138, BCR.195, BCR.268
3 PLIP interactions:3 interactions with chain X- Hydrophobic interactions: X:N.16, X:I.20, X:L.32
SQD.245: 13 residues within 4Å:- Chain 0: N.219, F.221, R.222
- Chain 6: F.36
- Chain X: F.255, N.257, S.260, F.263, W.268
- Chain Z: Q.5, A.11, W.13
- Ligands: LHG.253
10 PLIP interactions:5 interactions with chain X, 1 interactions with chain Z, 3 interactions with chain 0, 1 interactions with chain 6- Hydrophobic interactions: X:F.263, X:W.268, 6:F.36
- Hydrogen bonds: X:N.257, X:S.260, X:S.260, Z:Q.5, 0:N.219, 0:F.221, 0:R.222
SQD.263: 10 residues within 4Å:- Chain 7: R.14
- Chain H: W.114
- Ligands: CLA.133, BCR.136, SQD.180
- Chain a: I.16, F.19, F.23, R.24, E.25
6 PLIP interactions:4 interactions with chain a, 1 interactions with chain 7, 1 interactions with chain H- Hydrophobic interactions: a:I.16, a:F.19, a:F.19, a:F.19
- Salt bridges: 7:R.14
- Hydrogen bonds: H:W.114
SQD.264: 8 residues within 4Å:- Chain 7: E.7, Q.8, N.9
- Chain 8: K.28
- Chain R: L.23, V.30
- Ligands: SQD.182, CLA.213
5 PLIP interactions:2 interactions with chain 8, 1 interactions with chain R, 2 interactions with chain 7- Salt bridges: 8:K.28, 8:K.28
- Hydrophobic interactions: R:L.23
- Hydrogen bonds: 7:Q.8, 7:N.9
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
BCT.119: 6 residues within 4Å:- Chain G: H.205, Y.236, H.262
- Chain J: H.203, Y.233, H.257
2 PLIP interactions:1 interactions with chain J, 1 interactions with chain G- Hydrogen bonds: J:H.203, G:H.205
BCT.246: 6 residues within 4Å:- Chain 0: H.203, Y.233, H.257
- Chain X: H.205, Y.236, H.262
2 PLIP interactions:1 interactions with chain 0, 1 interactions with chain X- Hydrogen bonds: 0:H.203, X:H.205
- 10 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
DGD.120: 9 residues within 4Å:- Chain G: V.92, D.93
- Chain Y: W.74, G.75, G.88, I.89
- Ligands: BCR.116, LMG.198, LHG.219
7 PLIP interactions:3 interactions with chain G, 4 interactions with chain Y- Hydrogen bonds: G:D.93, G:D.93, G:D.93
- Hydrophobic interactions: Y:W.74, Y:W.74, Y:I.89, Y:I.89
DGD.157: 19 residues within 4Å:- Chain I: P.194, F.195, G.196, G.197, E.198, G.199, W.200, V.202, V.204, D.205, C.265, F.269, N.270, N.271, T.272, D.337, L.338, R.339
- Ligands: CLA.146
13 PLIP interactions:13 interactions with chain I- Hydrophobic interactions: I:V.202
- Hydrogen bonds: I:F.195, I:G.197, I:G.197, I:W.200, I:I.201, I:N.271, I:T.272, I:T.272, I:D.337, I:D.337, I:R.339, I:R.339
DGD.158: 14 residues within 4Å:- Chain I: E.60, Q.61, G.62, S.383, N.395, Y.396, V.397, W.402
- Chain O: I.20, F.24, Y.28
- Ligands: CLA.145, DGD.159, LMG.179
7 PLIP interactions:4 interactions with chain O, 3 interactions with chain I- Hydrophobic interactions: O:I.20, O:I.20, O:F.24, O:F.24
- Hydrogen bonds: I:S.383, I:N.395, I:V.397
DGD.159: 18 residues within 4Å:- Chain G: F.290, N.291
- Chain I: L.381, N.382, S.383, V.384, N.392, A.393, V.394, N.395
- Chain O: F.24, S.27, G.32, S.33, S.34
- Ligands: CLA.145, DGD.158, LMG.173
7 PLIP interactions:3 interactions with chain I, 4 interactions with chain O- Hydrogen bonds: I:N.382, I:V.394, I:N.395, O:G.32, O:S.34, O:S.34
- Hydrophobic interactions: O:F.24
DGD.176: 15 residues within 4Å:- Chain H: F.249, G.253, W.256, Y.257, Y.272, Q.276, F.462
- Chain J: A.75, H.76, L.151
- Chain M: L.46, Y.49, N.50, M.60
- Ligands: CLA.121
8 PLIP interactions:3 interactions with chain M, 3 interactions with chain H, 2 interactions with chain J- Hydrophobic interactions: M:L.46, M:Y.49, M:Y.49, H:W.256, H:F.462
- Hydrogen bonds: H:Q.276, J:H.76
- Salt bridges: J:H.76
DGD.186: 9 residues within 4Å:- Chain 9: K.77
- Chain H: W.74, G.75, G.88, I.89
- Chain X: V.92, D.93
- Ligands: LHG.139, LMG.258
8 PLIP interactions:4 interactions with chain H, 3 interactions with chain X, 1 interactions with chain 9- Hydrophobic interactions: H:W.74, H:W.74, H:I.89, H:I.89
- Hydrogen bonds: X:D.93, X:D.93, X:D.93, 9:K.77
DGD.238: 19 residues within 4Å:- Chain Z: P.194, F.195, G.196, G.197, E.198, G.199, W.200, V.202, V.204, D.205, C.265, F.269, N.270, N.271, T.272, D.337, L.338, R.339
- Ligands: CLA.227
13 PLIP interactions:13 interactions with chain Z- Hydrophobic interactions: Z:V.202
- Hydrogen bonds: Z:F.195, Z:G.197, Z:G.197, Z:W.200, Z:I.201, Z:N.271, Z:T.272, Z:T.272, Z:D.337, Z:D.337, Z:R.339, Z:R.339
DGD.239: 12 residues within 4Å:- Chain 5: Y.28
- Chain Z: E.60, Q.61, G.62, S.383, N.395, Y.396, V.397, W.402
- Ligands: CLA.226, DGD.259, LMG.262
3 PLIP interactions:3 interactions with chain Z- Hydrogen bonds: Z:S.383, Z:N.395, Z:V.397
DGD.257: 15 residues within 4Å:- Chain 0: A.75, H.76, I.112, I.148, L.151, G.152
- Chain 3: L.46, Y.49, N.50, M.60
- Chain Y: Y.257, Y.272, Q.276, F.462
- Ligands: CLA.201
11 PLIP interactions:6 interactions with chain 0, 3 interactions with chain 3, 2 interactions with chain Y- Hydrophobic interactions: 0:I.112, 0:I.148, 0:L.151, 3:L.46, 3:Y.49, 3:Y.49, Y:F.462
- Hydrogen bonds: 0:H.76, Y:Q.276
- Salt bridges: 0:H.76, 0:H.76
DGD.259: 19 residues within 4Å:- Chain 5: F.24, S.27, Y.28, G.32, S.33, S.34
- Chain X: F.290, N.291
- Chain Z: L.381, N.382, S.383, V.384, N.392, A.393, V.394, N.395
- Ligands: CLA.226, DGD.239, LMG.254
7 PLIP interactions:3 interactions with chain Z, 4 interactions with chain 5- Hydrogen bonds: Z:N.382, Z:V.394, Z:N.395, 5:G.32, 5:S.34, 5:S.34
- Hydrophobic interactions: 5:F.24
- 14 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
LMG.140: 10 residues within 4Å:- Chain H: T.158, L.160, N.181, W.184
- Ligands: CLA.185, CHL.275, CHL.276, XAT.283
- Chain e: G.115, K.116
2 PLIP interactions:2 interactions with chain e- Hydrogen bonds: e:K.116, e:K.116
LMG.163: 8 residues within 4Å:- Chain I: W.74, F.86, P.87
- Chain W: S.59, S.62
- Chain f: F.208, N.211, L.213
8 PLIP interactions:3 interactions with chain I, 2 interactions with chain W, 3 interactions with chain f- Hydrophobic interactions: I:W.74, I:F.86, I:F.86, f:F.208, f:L.213, f:L.213
- Hydrogen bonds: W:S.62, W:S.62
LMG.173: 13 residues within 4Å:- Chain J: Y.56, G.59, C.60, N.61, F.62
- Chain L: I.22, M.25, Q.26
- Chain O: L.31, G.32
- Ligands: CLA.113, DGD.159, BCR.168
6 PLIP interactions:3 interactions with chain J, 2 interactions with chain L, 1 interactions with chain O- Hydrophobic interactions: J:F.62, J:F.62
- Hydrogen bonds: J:F.62, L:M.25, L:Q.26, O:L.31
LMG.179: 5 residues within 4Å:- Chain I: H.51
- Chain O: Y.25
- Chain P: D.14
- Ligands: CLA.145, DGD.158
2 PLIP interactions:1 interactions with chain I, 1 interactions with chain O- Salt bridges: I:H.51
- Hydrophobic interactions: O:Y.25
LMG.184: 17 residues within 4Å:- Chain G: F.83, P.85, W.87, E.88
- Chain I: K.192, S.193, E.198, W.200
- Chain N: K.5, Y.9, V.16
- Chain U: T.8, G.12, L.13, F.15, G.16
- Ligands: CLA.115
12 PLIP interactions:3 interactions with chain U, 2 interactions with chain G, 6 interactions with chain N, 1 interactions with chain I- Hydrogen bonds: U:T.8, U:L.13, U:L.13, G:W.87, G:E.88, N:K.5, N:K.5, N:Y.9, N:Y.9
- Hydrophobic interactions: N:V.16, I:W.200
- Salt bridges: N:K.5
LMG.198: 8 residues within 4Å:- Chain N: M.1
- Chain Y: N.86, G.88, I.89, W.90
- Ligands: BCR.116, DGD.120, LHG.219
No protein-ligand interaction detected (PLIP)LMG.220: 10 residues within 4Å:- Chain Y: T.158, L.160, N.181, W.184
- Ligands: CLA.200, CHL.317, CHL.318, XAT.325
- Chain h: G.115, K.116
3 PLIP interactions:3 interactions with chain h- Hydrogen bonds: h:K.116, h:K.116
- Salt bridges: h:K.116
LMG.222: 19 residues within 4Å:- Chain 4: K.5, Y.9
- Chain X: F.83, P.85, W.87, E.88
- Chain Z: L.191, K.192, S.193, E.198, W.200
- Ligands: CLA.194
- Chain b: T.8, E.9, G.10, T.11, G.12, L.13, F.15
8 PLIP interactions:5 interactions with chain b, 1 interactions with chain Z, 2 interactions with chain X- Hydrogen bonds: b:T.8, b:T.8, b:G.12, b:L.13, b:L.13, X:W.87, X:E.88
- Hydrophobic interactions: Z:W.200
LMG.243: 8 residues within 4Å:- Chain Z: W.74, F.86, P.87
- Chain d: S.59, S.62
- Chain g: F.208, N.211, L.213
9 PLIP interactions:3 interactions with chain g, 4 interactions with chain Z, 2 interactions with chain d- Hydrophobic interactions: g:F.208, g:F.208, g:L.213, Z:W.74, Z:F.86, Z:F.86, Z:P.87
- Hydrogen bonds: d:S.62, d:S.62
LMG.254: 15 residues within 4Å:- Chain 0: Y.56, G.59, C.60, N.61, F.62
- Chain 2: I.22, M.25, Q.26
- Chain 5: G.26, S.27, L.31, G.32
- Ligands: CLA.192, BCR.249, DGD.259
6 PLIP interactions:3 interactions with chain 0, 1 interactions with chain 5, 2 interactions with chain 2- Hydrophobic interactions: 0:F.62, 0:F.62
- Hydrogen bonds: 0:F.62, 5:L.31, 2:M.25, 2:Q.26
LMG.258: 8 residues within 4Å:- Chain 4: M.1
- Chain H: N.86, G.88, I.89, W.90
- Ligands: LHG.139, DGD.186, BCR.195
1 PLIP interactions:1 interactions with chain H- Hydrophobic interactions: H:I.89
LMG.262: 5 residues within 4Å:- Chain 5: Y.25
- Chain 6: D.14
- Chain Z: H.51
- Ligands: CLA.226, DGD.239
2 PLIP interactions:1 interactions with chain 5, 1 interactions with chain Z- Hydrophobic interactions: 5:Y.25
- Salt bridges: Z:H.51
LMG.266: 6 residues within 4Å:- Chain 8: N.4
- Chain T: M.1
- Chain Y: A.326, G.327, N.331
- Ligands: CLA.206
2 PLIP interactions:1 interactions with chain Y, 1 interactions with chain T- Hydrophobic interactions: Y:A.326
- Hydrogen bonds: T:M.1
LMG.267: 7 residues within 4Å:- Chain H: A.326, G.327, N.331
- Chain R: N.4, L.6
- Ligands: CLA.126
- Chain a: M.1
3 PLIP interactions:1 interactions with chain H, 2 interactions with chain R- Hydrophobic interactions: H:A.326, R:L.6, R:L.6
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)
HEM.174: 11 residues within 4Å:- Chain K: R.1, I.6, Y.12, I.15, H.16, T.19
- Chain L: R.4, W.5, V.8, H.9, A.12
13 PLIP interactions:7 interactions with chain K, 6 interactions with chain L,- Hydrophobic interactions: K:I.6, K:Y.12, K:I.15, K:T.19, L:V.8, L:H.9, L:A.12
- Salt bridges: K:R.1, L:R.4
- pi-Stacking: K:Y.12, L:H.9
- pi-Cation interactions: K:H.16, L:H.9
HEM.255: 10 residues within 4Å:- Chain 1: R.1, F.3, I.6, Y.12, H.16
- Chain 2: R.4, W.5, V.8, H.9, A.12
12 PLIP interactions:6 interactions with chain 1, 6 interactions with chain 2,- Hydrophobic interactions: 1:F.3, 1:I.6, 2:V.8, 2:H.9, 2:A.12
- Salt bridges: 1:R.1, 1:R.1, 2:R.4
- pi-Stacking: 1:Y.12, 1:H.16, 2:H.9
- pi-Cation interactions: 2:H.9
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Grinzato, A. et al., High-Light versus Low-Light: Effects on Paired Photosystem II Supercomplex Structural Rearrangement in Pea Plants. Int J Mol Sci (2020)
- Release Date
- 2020-11-25
- Peptides
- Chlorophyll a-b binding protein 8, chloroplastic: ABCDEF
Photosystem II protein D1: GX
Photosystem II CP47 reaction center protein: HY
Photosystem II CP43 reaction center protein: IZ
Photosystem II D2 protein: J0
Cytochrome b559 subunit alpha: K1
Cytochrome b559 subunit beta: L2
Photosystem II reaction center protein H: M3
Photosystem II reaction center protein I: N4
Photosystem II reaction center protein J: O5
Photosystem II reaction center protein K: P6
Photosystem II reaction center protein L: Q7
Photosystem II reaction center protein M: R8
Oxygen-evolving enhancer protein 1, chloroplastic: S9
Photosystem II reaction center protein T: Ta
Photosystem II reaction center protein W: Ub
Ultraviolet-B-repressible protein: Vc
Photosystem II reaction center protein Z: Wd
Light harvesting chlorophyll a/b-binding protein Lhcb4.3: eh
Light harvesting chlorophyll a/b-binding protein Lhcb5, CP26: fg - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
gB
nC
yD
GE
NF
YG
aX
AH
bY
BI
cZ
CJ
d0
DK
e1
EL
f2
FM
h3
HN
i4
IO
j5
JP
k6
KQ
l7
LR
m8
MS
o9
OT
ta
TU
wb
WV
xc
XW
zd
Ze
rh
Rf
sg
S - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-2-mer
- Ligands
- 48 x CHL: CHLOROPHYLL B(Non-covalent)(Covalent)
- 150 x CLA: CHLOROPHYLL A(Non-covalent)(Covalent)
- 12 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 8 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
- 7 x NEX: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL(Non-covalent)
- 26 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)(Covalent)
- 2 x OEX: CA-MN4-O5 CLUSTER(Non-covalent)
- 2 x FE2: FE (II) ION(Non-covalent)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x PHO: PHEOPHYTIN A(Non-covalent)
- 22 x BCR: BETA-CAROTENE(Non-covalent)
- 4 x PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE(Non-covalent)
- 8 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)(Covalent)
- 2 x BCT: BICARBONATE ION(Non-functional Binders)
- 10 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
- 14 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Grinzato, A. et al., High-Light versus Low-Light: Effects on Paired Photosystem II Supercomplex Structural Rearrangement in Pea Plants. Int J Mol Sci (2020)
- Release Date
- 2020-11-25
- Peptides
- Chlorophyll a-b binding protein 8, chloroplastic: ABCDEF
Photosystem II protein D1: GX
Photosystem II CP47 reaction center protein: HY
Photosystem II CP43 reaction center protein: IZ
Photosystem II D2 protein: J0
Cytochrome b559 subunit alpha: K1
Cytochrome b559 subunit beta: L2
Photosystem II reaction center protein H: M3
Photosystem II reaction center protein I: N4
Photosystem II reaction center protein J: O5
Photosystem II reaction center protein K: P6
Photosystem II reaction center protein L: Q7
Photosystem II reaction center protein M: R8
Oxygen-evolving enhancer protein 1, chloroplastic: S9
Photosystem II reaction center protein T: Ta
Photosystem II reaction center protein W: Ub
Ultraviolet-B-repressible protein: Vc
Photosystem II reaction center protein Z: Wd
Light harvesting chlorophyll a/b-binding protein Lhcb4.3: eh
Light harvesting chlorophyll a/b-binding protein Lhcb5, CP26: fg - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
gB
nC
yD
GE
NF
YG
aX
AH
bY
BI
cZ
CJ
d0
DK
e1
EL
f2
FM
h3
HN
i4
IO
j5
JP
k6
KQ
l7
LR
m8
MS
o9
OT
ta
TU
wb
WV
xc
XW
zd
Ze
rh
Rf
sg
S - Membrane
-
We predict this structure to be a membrane protein.