SMTL ID : 6ypu.1

Acinetobacter baumannii ribosome-amikacin complex - 30S subunit body

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
59 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
1 x AKN: (2S)-N-[(1R,2S,3S,4R,5S)-4-[(2R,3R,4S,5S,6R)-6-(aminomethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-azanyl-2-[(2S,3R,4S,5S ,6R)-4-azanyl-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-cyclohexyl]-4-azanyl-2-oxidanyl-butanamide(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Nicholson, D. et al., Structure of the 70S Ribosome from the Human Pathogen Acinetobacter baumannii in Complex with Clinically Relevant Antibiotics. Structure (2020)
Release Date
2020-09-16
Peptides
30S ribosomal protein S2: C
30S ribosomal protein S4: D
30S ribosomal protein S5: E
30S ribosomal protein S6: F
30S ribosomal protein S8: G
30S ribosomal protein S11: H
30S ribosomal protein S12: I
30S ribosomal protein S15: J
30S ribosomal protein S16: K
30S ribosomal protein S17: L
30S ribosomal protein S18: M
30S ribosomal protein S20: N
30S ribosomal protein S21: O
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
C
c
D
e
E
f
F
g
G
i
H
l
I
m
J
p
K
q
L
r
M
s
N
u
O
v

30S ribosomal protein S2

30S ribosomal protein S4

30S ribosomal protein S5

30S ribosomal protein S6

30S ribosomal protein S8

30S ribosomal protein S11

30S ribosomal protein S12

30S ribosomal protein S15

30S ribosomal protein S16

30S ribosomal protein S17

30S ribosomal protein S18

30S ribosomal protein S20

30S ribosomal protein S21

Related Entries With Identical Sequence

6v39.1 | 6v3a.1 | 6v3b.1 | 6v3e.1 | 6yt9.1 | 7m4u.1 | 7m4w.1 | 7m4x.1 | 7m4y.1 | 7m4z.1 | 7ryf.1 | 7ryg.1 | 7ryh.1 | 7uvv.1 | 7uvw.1 | 7uvx.1 | 7uvy.1 | 7uvz.1 | 7uw1.1