- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-10-mer
- Ligands
- 10 x F6R: FRUCTOSE -6-PHOSPHATE(Covalent)
- 16 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 7 residues within 4Å:- Chain A: D.142, Q.145
- Chain I: M.149
- Chain J: L.175, R.176, V.179
- Ligands: GOL.32
Ligand excluded by PLIPGOL.3: 11 residues within 4Å:- Chain A: D.137, M.144, N.170, I.172, H.173, R.176
- Chain J: N.170, I.172, H.173, R.176
- Ligands: GOL.33
Ligand excluded by PLIPGOL.6: 10 residues within 4Å:- Chain B: N.170, I.172, H.173, R.176
- Chain I: D.137, N.170, I.172, H.173, R.176
- Ligands: GOL.30
Ligand excluded by PLIPGOL.9: 6 residues within 4Å:- Chain B: M.149
- Chain C: L.175, R.176, V.179
- Chain H: D.142, Q.145
Ligand excluded by PLIPGOL.10: 11 residues within 4Å:- Chain C: N.170, I.172, H.173, R.176
- Chain H: D.137, M.144, N.170, I.172, H.173, R.176
- Ligands: GOL.27
Ligand excluded by PLIPGOL.13: 10 residues within 4Å:- Chain D: N.170, I.172, H.173, R.176
- Chain G: D.137, N.170, I.172, H.173, R.176
- Ligands: GOL.23
Ligand excluded by PLIPGOL.15: 4 residues within 4Å:- Chain E: R.176, V.179, I.180
- Ligands: GOL.19
Ligand excluded by PLIPGOL.16: 11 residues within 4Å:- Chain E: D.137, M.144, N.170, I.172, H.173, R.176
- Chain F: N.170, I.172, H.173, R.176
- Ligands: GOL.20
Ligand excluded by PLIPGOL.19: 7 residues within 4Å:- Chain D: M.149
- Chain E: L.175, R.176, V.179
- Chain F: D.142, Q.145
- Ligands: GOL.15
Ligand excluded by PLIPGOL.20: 11 residues within 4Å:- Chain E: N.170, I.172, H.173, R.176
- Chain F: D.137, M.144, N.170, I.172, H.173, R.176
- Ligands: GOL.16
Ligand excluded by PLIPGOL.23: 10 residues within 4Å:- Chain D: D.137, N.170, I.172, H.173, R.176
- Chain G: N.170, I.172, H.173, R.176
- Ligands: GOL.13
Ligand excluded by PLIPGOL.26: 6 residues within 4Å:- Chain C: D.142, Q.145
- Chain G: M.149
- Chain H: L.175, R.176, V.179
Ligand excluded by PLIPGOL.27: 11 residues within 4Å:- Chain C: D.137, M.144, N.170, I.172, H.173, R.176
- Chain H: N.170, I.172, H.173, R.176
- Ligands: GOL.10
Ligand excluded by PLIPGOL.30: 10 residues within 4Å:- Chain B: D.137, N.170, I.172, H.173, R.176
- Chain I: N.170, I.172, H.173, R.176
- Ligands: GOL.6
Ligand excluded by PLIPGOL.32: 4 residues within 4Å:- Chain J: R.176, V.179, I.180
- Ligands: GOL.2
Ligand excluded by PLIPGOL.33: 11 residues within 4Å:- Chain A: N.170, I.172, H.173, R.176
- Chain J: D.137, M.144, N.170, I.172, H.173, R.176
- Ligands: GOL.3
Ligand excluded by PLIP- 8 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 2 residues within 4Å:- Chain A: R.176, I.180
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:I.180
- Salt bridges: A:R.176
ACT.7: 4 residues within 4Å:- Chain B: R.169, N.170
- Chain I: R.169, N.170
8 PLIP interactions:2 interactions with chain B, 6 interactions with chain I- Hydrogen bonds: B:N.170, I:N.170
- Water bridges: B:H.173, I:R.169, I:R.169, I:R.169
- Hydrophobic interactions: I:R.169
- Salt bridges: I:H.173
ACT.11: 5 residues within 4Å:- Chain C: R.169, N.170
- Chain H: R.169, N.170
- Ligands: ACT.28
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain H- Hydrophobic interactions: C:R.169
- Hydrogen bonds: C:N.170, H:N.170
ACT.17: 4 residues within 4Å:- Chain E: R.169, N.170
- Chain F: R.169, N.170
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain E- Hydrophobic interactions: F:R.169
- Hydrogen bonds: F:N.170, E:N.170
- Water bridges: F:R.169
ACT.21: 2 residues within 4Å:- Chain F: R.176, I.180
2 PLIP interactions:2 interactions with chain F- Hydrophobic interactions: F:I.180
- Salt bridges: F:R.176
ACT.24: 4 residues within 4Å:- Chain D: R.169, N.170
- Chain G: R.169, N.170
8 PLIP interactions:2 interactions with chain G, 6 interactions with chain D- Hydrogen bonds: G:N.170, D:N.170
- Water bridges: G:H.173, D:R.169, D:R.169, D:R.169
- Hydrophobic interactions: D:R.169
- Salt bridges: D:H.173
ACT.28: 5 residues within 4Å:- Chain C: R.169, N.170
- Chain H: R.169, N.170
- Ligands: ACT.11
3 PLIP interactions:2 interactions with chain H, 1 interactions with chain C- Hydrophobic interactions: H:R.169
- Hydrogen bonds: H:N.170, C:N.170
ACT.34: 4 residues within 4Å:- Chain A: R.169, N.170
- Chain J: R.169, N.170
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain J- Hydrophobic interactions: A:R.169
- Hydrogen bonds: A:N.170, J:N.170
- Water bridges: A:R.169
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sautner, V. et al., Large-scale motions underlie physical but not chemical steps in transaldolase mechanism: Substrate binding by conformational selection and rate-determining product release. To Be Published
- Release Date
- 2021-05-12
- Peptides
- Transaldolase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
AG
BH
CI
DJ
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-10-mer
- Ligands
- 10 x F6R: FRUCTOSE -6-PHOSPHATE(Covalent)
- 16 x GOL: GLYCEROL(Non-functional Binders)
- 8 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sautner, V. et al., Large-scale motions underlie physical but not chemical steps in transaldolase mechanism: Substrate binding by conformational selection and rate-determining product release. To Be Published
- Release Date
- 2021-05-12
- Peptides
- Transaldolase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
AG
BH
CI
DJ
E