- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-10-mer
- Ligands
- 10 x F6R: FRUCTOSE -6-PHOSPHATE(Covalent)
- 16 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 6 residues within 4Å:- Chain A: D.142, Q.145
- Chain J: L.175, R.176, V.179
- Ligands: GOL.32
Ligand excluded by PLIPGOL.3: 11 residues within 4Å:- Chain A: D.137, M.144, N.170, I.172, H.173, R.176
- Chain J: N.170, I.172, H.173, R.176
- Ligands: GOL.33
Ligand excluded by PLIPGOL.6: 10 residues within 4Å:- Chain B: N.170, I.172, H.173, R.176
- Chain I: D.137, N.170, I.172, H.173, R.176
- Ligands: GOL.30
Ligand excluded by PLIPGOL.9: 6 residues within 4Å:- Chain B: M.149
- Chain C: L.175, R.176, V.179
- Chain H: D.142, Q.145
Ligand excluded by PLIPGOL.10: 10 residues within 4Å:- Chain C: N.170, I.172, H.173, R.176
- Chain H: D.137, N.170, I.172, H.173, R.176
- Ligands: GOL.27
Ligand excluded by PLIPGOL.13: 11 residues within 4Å:- Chain D: M.144, N.170, I.172, H.173, R.176
- Chain G: D.137, N.170, I.172, H.173, R.176
- Ligands: GOL.23
Ligand excluded by PLIPGOL.15: 4 residues within 4Å:- Chain E: R.176, V.179, I.180
- Ligands: GOL.19
Ligand excluded by PLIPGOL.16: 12 residues within 4Å:- Chain E: D.137, M.144, N.170, I.172, H.173, R.176
- Chain F: M.144, N.170, I.172, H.173, R.176
- Ligands: GOL.20
Ligand excluded by PLIPGOL.19: 6 residues within 4Å:- Chain E: L.175, R.176, V.179
- Chain F: D.142, Q.145
- Ligands: GOL.15
Ligand excluded by PLIPGOL.20: 11 residues within 4Å:- Chain E: N.170, I.172, H.173, R.176
- Chain F: D.137, M.144, N.170, I.172, H.173, R.176
- Ligands: GOL.16
Ligand excluded by PLIPGOL.23: 10 residues within 4Å:- Chain D: D.137, N.170, I.172, H.173, R.176
- Chain G: N.170, I.172, H.173, R.176
- Ligands: GOL.13
Ligand excluded by PLIPGOL.26: 6 residues within 4Å:- Chain C: D.142, Q.145
- Chain G: M.149
- Chain H: L.175, R.176, V.179
Ligand excluded by PLIPGOL.27: 10 residues within 4Å:- Chain C: D.137, N.170, I.172, H.173, R.176
- Chain H: N.170, I.172, H.173, R.176
- Ligands: GOL.10
Ligand excluded by PLIPGOL.30: 11 residues within 4Å:- Chain B: D.137, N.170, I.172, H.173, R.176
- Chain I: M.144, N.170, I.172, H.173, R.176
- Ligands: GOL.6
Ligand excluded by PLIPGOL.32: 4 residues within 4Å:- Chain J: R.176, V.179, I.180
- Ligands: GOL.2
Ligand excluded by PLIPGOL.33: 12 residues within 4Å:- Chain A: M.144, N.170, I.172, H.173, R.176
- Chain J: D.137, M.144, N.170, I.172, H.173, R.176
- Ligands: GOL.3
Ligand excluded by PLIP- 8 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 5 residues within 4Å:- Chain A: M.1
- Chain E: L.119, K.123, Y.157, I.159
4 PLIP interactions:3 interactions with chain E, 1 interactions with chain A- Hydrophobic interactions: E:K.123, E:I.159
- Salt bridges: E:K.123
- Hydrogen bonds: A:M.1
ACT.7: 4 residues within 4Å:- Chain B: R.169, N.170
- Chain I: R.169, N.170
6 PLIP interactions:4 interactions with chain I, 2 interactions with chain B- Hydrophobic interactions: I:R.169
- Hydrogen bonds: I:N.170, B:N.170
- Water bridges: I:R.169, I:R.169, B:R.169
ACT.11: 5 residues within 4Å:- Chain C: R.169, N.170
- Chain H: R.169, N.170
- Ligands: ACT.28
3 PLIP interactions:1 interactions with chain H, 2 interactions with chain C- Hydrogen bonds: H:N.170, C:N.170
- Hydrophobic interactions: C:R.169
ACT.17: 4 residues within 4Å:- Chain E: R.169, N.170
- Chain F: R.169, N.170
5 PLIP interactions:1 interactions with chain F, 4 interactions with chain E- Hydrogen bonds: F:N.170, E:N.170
- Hydrophobic interactions: E:R.169
- Water bridges: E:R.169, E:R.169
ACT.21: 5 residues within 4Å:- Chain F: M.1
- Chain J: L.119, K.123, Y.157, I.159
4 PLIP interactions:3 interactions with chain J, 1 interactions with chain F- Hydrophobic interactions: J:K.123, J:I.159
- Salt bridges: J:K.123
- Hydrogen bonds: F:M.1
ACT.24: 4 residues within 4Å:- Chain D: R.169, N.170
- Chain G: R.169, N.170
6 PLIP interactions:4 interactions with chain D, 2 interactions with chain G- Hydrophobic interactions: D:R.169
- Hydrogen bonds: D:N.170, G:N.170
- Water bridges: D:R.169, D:R.169, G:R.169
ACT.28: 5 residues within 4Å:- Chain C: R.169, N.170
- Chain H: R.169, N.170
- Ligands: ACT.11
3 PLIP interactions:2 interactions with chain H, 1 interactions with chain C- Hydrophobic interactions: H:R.169
- Hydrogen bonds: H:N.170, C:N.170
ACT.34: 4 residues within 4Å:- Chain A: R.169, N.170
- Chain J: R.169, N.170
6 PLIP interactions:3 interactions with chain J, 3 interactions with chain A- Hydrophobic interactions: J:R.169
- Hydrogen bonds: J:N.170, A:N.170
- Water bridges: J:R.169, A:D.138, A:D.138
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sautner, V. et al., Large-scale motions underlie physical but not chemical steps in transaldolase mechanism: Substrate binding by conformational selection and rate-determining product release. To Be Published
- Release Date
- 2021-05-12
- Peptides
- Probable transaldolase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
AG
BH
CI
DJ
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-10-mer
- Ligands
- 10 x F6R: FRUCTOSE -6-PHOSPHATE(Covalent)
- 16 x GOL: GLYCEROL(Non-functional Binders)
- 8 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sautner, V. et al., Large-scale motions underlie physical but not chemical steps in transaldolase mechanism: Substrate binding by conformational selection and rate-determining product release. To Be Published
- Release Date
- 2021-05-12
- Peptides
- Probable transaldolase: ABCDEFGHIJ
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
AG
BH
CI
DJ
E