SMTL ID : 6ytu.1

Atomic-resolution structure of the coiled-coil dimerisation domain of human Arc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.95 Å

Oligo State

homo-dimer

Ligands

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 3 residues within 4Å: Chain A: R.28, W.29, R.32 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.28, A:W.29 Hydrogen bonds: A:R.28 MPD.3: 4 residues within 4Å: Chain B: T.4, N.7, L.8, W.11 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:T.4, B:N.7, B:L.8 Hydrogen bonds: B:N.7, B:N.7

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: R.25 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eriksen, M.S. et al., Arc self-association and formation of virus-like capsids are mediated by an N-terminal helical coil motif. Febs J. (2021)

Release Date

2021-03-03

Peptides

Activity-regulated cytoskeleton-associated protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Activity-regulated cytoskeleton-associated protein