SMTL ID : 6yv8.2 (1 other biounit)

Mannosyltransferase PcManGT from Pyrobaculum calidifontis in complex with GDP and Mn2+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 17 residues within 4Å: Chain A: P.49, T.50, Y.51, E.53, V.79, S.81, R.111, G.113, K.114, A.117, D.134, A.135, D.136, W.256, R.259, R.260 Ligands: MN.2 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:T.50, A:Y.51, A:E.53, A:E.53, A:V.79, A:S.81, A:S.81, A:S.81, A:G.113, A:A.135 Salt bridges: A:R.259, A:R.259, A:R.260

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 2 residues within 4Å: Chain A: D.136 Ligands: GDP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gandini, R. et al., A Transmembrane Crenarchaeal Mannosyltransferase Is Involved in N-Glycan Biosynthesis and Displays an Unexpected Minimal Cellulose-Synthase-like Fold. J.Mol.Biol. (2020)

Release Date

2020-07-22

Peptides

Glycosyl transferase, family 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
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Glycosyl transferase, family 2

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