SMTL ID : 6z0d.1

tRNA-Guanine Transglycosylase (TGT) H333F mutant crystallised at pH 5.5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: P.58, E.59, G.96, W.97, D.98, R.99 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.98, A:D.98, A:R.99 Water bridges: A:E.59, A:R.99 GOL.3: 6 residues within 4Å: Chain B: P.58, E.59, G.96, W.97, D.98, R.99 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.98, B:D.98, B:R.99 Water bridges: B:E.59, B:R.99

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.320, C.322, C.325, H.351 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.320, A:C.322, A:C.325, A:H.351 ZN.4: 4 residues within 4Å: Chain B: C.320, C.322, C.325, H.351 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.320, B:C.322, B:C.325, B:H.351

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, A. et al., Mutation study on tRNA-guanine transglycosylase for catalysis testing. To Be Published

Release Date

2020-05-20

Peptides

Queuine tRNA-ribosyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Queuine tRNA-ribosyltransferase

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