SMTL ID : 6z2f.1

Crystal structure of human AGX1 mutant complexed with UDPGLCNAC

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE(Non-covalent)

UD1.1: 18 residues within 4Å: Chain A: L.112, A.113, M.169, Q.200, P.224, G.226, N.227, C.255, V.256, V.293, G.294, E.307, Y.308, N.331, F.385, F.387, F.407, K.411 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.385, A:F.387 Hydrogen bonds: A:Q.200, A:Q.200, A:G.226, A:N.227, A:V.256, A:G.294, A:E.307, A:Y.308, A:N.331, A:K.411 Salt bridges: A:K.411, A:K.411, A:K.411 UD1.2: 19 residues within 4Å: Chain B: G.114, G.115, Q.116, G.117, T.118, R.119, K.126, N.227, C.255, D.257, V.293, G.294, E.307, Y.308, N.331, F.385, F.387, F.407, K.411 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:R.119, B:F.385, B:F.387 Hydrogen bonds: B:G.115, B:Q.116, B:R.119, B:N.227, B:D.257, B:G.294, B:E.307, B:N.331, B:K.411 Water bridges: B:Q.116, B:R.119, B:R.119, B:K.126, B:D.257, B:E.307, B:E.307, B:K.411 Salt bridges: B:R.119, B:R.119, B:K.126, B:K.411, B:K.411, B:K.411

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X. et al., Crystal structure of human AGX1 mutant complexed with UDPGLCNAC. To Be Published

Release Date

2021-05-26

Peptides

UDP-N-acetylhexosamine pyrophosphorylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

UDP-N-acetylhexosamine pyrophosphorylase