SMTL ID : 6z6a.1 (1 other biounit)

Keap1 macrocycle complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.37 Å

Oligo State

monomer

Ligands

1 x Q9E: (5S,8R)-8-[[(2S)-1-ethanoylpyrrolidin-2-yl]carbonylamino]-N,N-dimethyl-7,11-bis(oxidanylidene)-10-oxa-3-thia-6-azabicyclo[10.4.0]hexadeca-1(16),12,14-triene-5-carboxamide(Non-covalent)

Q9E.1: 12 residues within 4Å: Chain A: Y.20, S.49, G.50, N.68, R.101, G.195, A.242, Y.258, F.263, S.288, G.289 Ligands: CL.3 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.101, A:A.242 Hydrogen bonds: A:S.288

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: Y.159, Y.223 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.159, A:Y.159

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: N.68, N.100, R.101 Ligands: Q9E.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Begnini, F. et al., Mining Natural Products for Macrocycles to Drug Difficult Targets. J.Med.Chem. (2021)

Release Date

2020-12-30

Peptides

Kelch-like ECH-associated protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kelch-like ECH-associated protein 1

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